FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_E8_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_E8_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGTGTGGGTGGGGAGCGGGGTGTTTCTGTCTGATGGGGGTGGTTGGTG13.0303030303030303No Hit
GGCTGTGACCGGGTTCCAGCCTGGATTCAATGATTACACTGATAAACTTG13.0303030303030303No Hit
GGCAGACAATCGACTGAGCCACCTAGTTGCCCTGGTTAATCTATTTTCTG13.0303030303030303No Hit
TGATGGGTTTGGTTATATGTGGATTTATTGTTCAGGTTGTGAATCTGAGT13.0303030303030303No Hit
GTATGAATGAAAGTCGAATCTAGTGCCAACGTTTTTGAGAGGGGGAGTTG13.0303030303030303No Hit
GAACTTAAAGAAAACAAAAAGGGACTCTATCATACTTACTGACATCTAAC13.0303030303030303No Hit
CTTTTGAAGCGTGCCATTTCCTTCAGTGTAAAGGGGTTACTGAAGACCAC13.0303030303030303No Hit
CTCTGATTCAAGAAGACTAAATTTCAAGATTTGTTTTCTTTCTCCTCCCC13.0303030303030303No Hit
AATAATAAAATTGAACATAAATGATAACTAAATCATATAATAACATAAAT13.0303030303030303No Hit
GGGGTGGCCTGTTGCCCGGGGGGGGCGGTCGGTGATGCTGTTGAGTGGTC13.0303030303030303No Hit
CAATACAGCAATCTAACACGAACAGGATAAACCAATGACACACTCAACAC13.0303030303030303No Hit
CACCCGCACACGACAGATACTCACTAAGAACAAAGTTCACCAAATCGACC13.0303030303030303No Hit
ATTTTTCCCACTAAATAATAGGTCCTGGGTAGGGATAAATCTAATGCACC13.0303030303030303No Hit
GCCCGATGTGGGGCCTCGGTCCCAGGACCCTGGGATCATGACGTGAGCCG13.0303030303030303No Hit
ATTCAGATAAGGTTCTGATCCCCAGGTCCTGCGATAGAACCCCACAACAG13.0303030303030303No Hit
CTATCATCCCGTCAGGCCCCCTCAAAGCCGAGATCGCGCAGAGACTGGAA13.0303030303030303No Hit
GTAAATCTACAGTCTATCTTGGGCTAGAGATAGAATCATGAAAGTGCTTT13.0303030303030303No Hit
CCAGTCCTCGTGCTGGGGAAATTCTGGAACTCACAGAACCGGCATGTCGA13.0303030303030303No Hit
CATCCCAGTAGATAGGCACCCCTAACACACACTCCGTAGGATACCCACGC13.0303030303030303No Hit
AGGAATGACAGGCAGAGGGAGAAAAGCAGACTCCCTGCTAGGCAAGGAAC13.0303030303030303No Hit
GGCCAAACAAGAAAAAATAAAAAAAGACAAAAAAAAAAGCACTCTTATAA13.0303030303030303No Hit
AAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAA13.0303030303030303No Hit
GTATAAGGGAATGTGGAGCTTATTTTTAGCTGGAATTTTTAGTAAAAGTA13.0303030303030303No Hit
ATCCTGGGGTCCTGGGATCGAGCCCTGCATCGGGCTCCCTGCTCAGCGCT13.0303030303030303No Hit
CAAAATAACGCGGGAACCTATACTCTTAGGACAAATTTAGAGGATACACT13.0303030303030303No Hit
CAGAGTGGGACGCCTGGGTGGCTCAGTCATTAAGCGTCTGCCTTCGGCTT13.0303030303030303No Hit
ATTAGAAAGAAAGGATAAAAACAAATAACCATAAACAAAAACCCACTTAT13.0303030303030303No Hit
ACTTAGAACTAATTATCACACACTGAAAATCAAAGTAAGAAAAATATGTA13.0303030303030303No Hit
ATTTCCATGCGGGTGATATCTAAATTTTGGTAAAATTAAAAGACGCCGTT13.0303030303030303No Hit
GTCTAGGGCGCCTGCCCTGAGCCGCGGGGCGGCCGGTACTGGCGGAGCCG13.0303030303030303No Hit
GTCGTTTTTAAACTATTCGAAAACTAATTGATGACCATACGAATTCTTTT13.0303030303030303No Hit
GGTCACGATCCTGGGGTCCTGGGATGGAGCCCCACATCGGGTTCTTGCTC13.0303030303030303No Hit
TCCTGACTCTATTTTTATTAGACATGAGGTCTTAGCCAAGTCACTTCACC13.0303030303030303No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)