FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_E7_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_E7_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCACAAGTGGCACACACTAGACCAAAAGCAGCTTCTGTGGCTGTCTCT13.8461538461538463No Hit
TTTTTAAACAATTCGACACTAAAAGATGGCCAGCCCAATACTGTTGGTCG13.8461538461538463No Hit
GCCTTACTCCTTGCTTGACCTCCCATCTCACTTTCCCTTACTGACCTCGG13.8461538461538463No Hit
ACTCACAGATGTACAGACCAAATACACACATAACCAGAGAAACACTAAGA13.8461538461538463No Hit
TAACTATAGACCAAAAAAATATGTTATCTTTAATCCAAAAACAACTTAAT13.8461538461538463No Hit
CACACAAACACAAACAAACACACACACACACACAATTATCTCTTAGAAAG13.8461538461538463No Hit
TGACTGAATCATTAGCTACACCCGAGGTACAAACAGGGGTGCCTGAGCAA13.8461538461538463No Hit
CCTCATAAGAATGTCCTCGAAGATAAGTTAAAGGAGAAAATACTCCAACT13.8461538461538463No Hit
ATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGACGCTGTCTGGCT13.8461538461538463No Hit
TACCTAACCACAGACTGGAATTTACTGAATAAAATGCATTGTTGAGTTCC13.8461538461538463No Hit
AGATTACACTGAAGTTCGCTTTCAGTACTATGTTCTTTTCCTGTCTCTTA13.8461538461538463No Hit
TACCAACATAGACTAAAAAGAAACCAAAGAAAAAACACATTAAAATAAAA13.8461538461538463No Hit
AAACAGAAATCAAAAGTACTAAAAAGGCAAGTGAACGAAATGATAGAAAA13.8461538461538463No Hit
CAGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATAT13.8461538461538463No Hit
AGATGGTAGTCAATCAGAAGTTGGGAGAGGGATGCAGGGAAGGGGCTGTC13.8461538461538463No Hit
CATCTCGACTGTTCAATACATTGCAGCAAACTTGTTAGTATCGATTATCG13.8461538461538463No Hit
GTTTGTCAGGTTGTCTTCATAGAACAATTAATCCCAATTATACCTAACCA13.8461538461538463No Hit
GAATATCAACAGGAACAGCAGAGTGCTGTGGATGTTGACGATGGTCATTT13.8461538461538463No Hit
ATCATACACGGGAAGGGATAACACAAACCATCTAATGCTACACTCACAAA13.8461538461538463No Hit
AAACATACGAAAAATCTCAACATAAACCGATCACATCATACAAACACAAT13.8461538461538463No Hit
CAAAAAGAGTGTATGTTTCGATATCGAGGAAAATGGTGTTGCCTCTTCAT13.8461538461538463No Hit
TTTCTCATATGCATTTGACAAAAGAACTACTGATGGAGTGTTATTATGTC13.8461538461538463No Hit
CTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACC13.8461538461538463No Hit
ACAGGAGATTGTACCCATGAAAAAGGAGCAGTCAGACATCAGGAAAGACT13.8461538461538463No Hit
TCACAATGCACAAAAAGCACATTATCCATCTCTCATTATTCAAGATTGAT13.8461538461538463No Hit
CATAACAAACACCACCAACACAAGGTAAATGAGAAAAAACACCAACAAAA13.8461538461538463No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)