FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_E2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_E2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1888
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG50.26483050847457623No Hit
CCCAATTACAGCAGACAAGAGAATAATGGACATGGCCCAGCATTAAGCCT30.15889830508474578No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC30.15889830508474578No Hit
GACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGC30.15889830508474578No Hit
GCCATAAGCACCACATTCCCTTATACTGGAGATCCTCCATACAGCCATGG20.1059322033898305No Hit
CCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCT20.1059322033898305No Hit
TTCTCGTACAGATTTTTATTTTTCTTGGAGGTGATAACTGCTTCTTTTTG20.1059322033898305No Hit
GTCCAAGTCAGTAGTTCAAAGCTTACAGTGAGCGGCATTCCATAGCTGTC20.1059322033898305No Hit
GTCCTAGAAACCTATGAACCATGTTTAAGCATTTCACCCTCCAGAAGCCC20.1059322033898305No Hit
GTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGT20.1059322033898305No Hit
GTTTTGCTCCAGAGGGTTTGTCCTTGTTCATTCCTCTCTGGAACTGTCTC20.1059322033898305No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGTG20.1059322033898305No Hit
CGCATATAGACTGTTGAATACATTGCAGCAAACTTGTTAGTTTCGATTTT20.1059322033898305No Hit
CTACGTCCCCTTGCCCAATTAGCCTTCTCTCCTTTTGCAAGATTGCTCAG20.1059322033898305No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTATACACATCTGACGCT20.1059322033898305No Hit
GGAAACAAACTGACGTTAGATAATCTGGCAGAAGCCTTCCACTTATTCAA20.1059322033898305No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT20.1059322033898305No Hit
CTACGTCCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCTTTTGCAAGA20.1059322033898305No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGC20.1059322033898305No Hit
GCAAAAGCAGGTACTGATCCAAAATGGAAGACTTTGTGCGACAATGCTTC20.1059322033898305No Hit
GAGATCTAATGTCGCAGTCCCGCACTCGCGAGAGATACTCACTAAGACCA20.1059322033898305No Hit
CCACTCAGCAGGGAGCCCAATGTGGGACTCGATCCCAGGACCCTGAGATC20.1059322033898305No Hit
CCCTGGGCCCCCAGTCTGTTGGGTTTTAACTACCATCCTTTTCTCTCCAG20.1059322033898305No Hit
TAGCAGTTCATATAGGAGACCGGTTGGAATTTCTAGCATGGTGGAGGCCA20.1059322033898305No Hit
GGTTCATGCTCATGCCTAGGCAAAAGATAATAGGCCCTCTTTGCGTGCGA20.1059322033898305No Hit
GTGCTGTCCACGGAAGACATGGGAATAGATACTGTCTCTTATACACATCT20.1059322033898305No Hit
GAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAA20.1059322033898305No Hit
GGGCCATATCTCTTGCCTTCCTGATGTGTACTTTTTGATCTGTCTCTTAT20.1059322033898305No Hit
GTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGGCCC20.1059322033898305No Hit
ATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCAAGGGGACGTA20.1059322033898305No Hit
CCATTTGAATGGATGTCAATCCGACTCTACTTTTCCTAAAAATTCCAGCG20.1059322033898305No Hit
CCCCAAAGTAGTCTTTCCTGATGTCTGACTGCTCCTTTTTCATGGGTACA20.1059322033898305No Hit
ATGCGGGTGAAACCCTTTGTTAAAATTTTGGAAGTTTGGTTGAAGACAGC20.1059322033898305No Hit
CGAATATCCTGTTCCTGTTCCATGGCTGTATGGAGGATCTCCAGTATCTG20.1059322033898305No Hit
CTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTG20.1059322033898305No Hit
CTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGCCCAAT20.1059322033898305No Hit
ACCCAGGATCCTGGGATCAAGTCCCACATCGGGCTCCTTGCTCAGTGGGG20.1059322033898305No Hit
GAGGGAGAAGCAGGCTTCCCAAAGTGCAGGGAGCCTGATCTGTCTCTTAT20.1059322033898305No Hit
CACTACGTCCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCTTTTGCAA20.1059322033898305No Hit
GAGCAAAAGCAGGGTGACAAAAACATAATGGCTGTCTCTTATACACATCT20.1059322033898305No Hit
GGACAGGGTTGGTTATTGACTGAAACTGGGGATGAGGTAATGCTCTTTGT20.1059322033898305No Hit
GATTTTGGCTCAGATCATGATCTCAGGGTTGTGAGATCCAGCTCTGCACT20.1059322033898305No Hit
GGACAAACCCTCTGGAGCAAAACAAACGATGCTGGATCAGACCTGTCTCT20.1059322033898305No Hit
CTCTTGATAAGGAGGGTATTTAGCAACAAAAAGTGCGAAAAGCGGCTTTC20.1059322033898305No Hit
GCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGACTGTC20.1059322033898305No Hit
TTCTTGATCCGTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCCT20.1059322033898305No Hit
GAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGCTGTCTCT20.1059322033898305No Hit
GTCTATATGCGTCTCCACAACTTGAGGGGTTTTCGGCTGAATCTAGAAAA20.1059322033898305No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)