FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_D8_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_D8_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACAGTATTTGTCCTTCTGTGTCTGGTTTGTTTCACTTCTGTCTCTTAT21.9417475728155338No Hit
GGGAGAAGCAGGCTTCCTGCTGACAAGGAGCCTGATGCGGGGCTCCATCC21.9417475728155338No Hit
TTCCTATTCCACCATGTTACGGCCAGAGGTGATACCATCACTCGGTCTGA21.9417475728155338No Hit
GAGTTGGAGAGGGAGAAGCTGGCTTCCCGCCGAGCAGGGAGCCCAATGCG21.9417475728155338No Hit
TTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTATTC21.9417475728155338No Hit
GTTCAGTAGTCAGAAGTCTGTTGGAGAAGATTTCAGATTGAGTAAGGGGA21.9417475728155338No Hit
CTACACCTCAGCAAAGGAACATTTTCAGTGGGACCGTGATGTGAGTCTCA10.9708737864077669No Hit
GCGGTAGTTGGGGTCCCCCCAGGGCATTGAGGCACATATCGGGCAAACCA10.9708737864077669No Hit
GACCAGGAAACAACTAACAAAAAGAAAATTTACAACATTGAAGCATACAC10.9708737864077669No Hit
GTAATGAAACGAAAACGGGACTCTAGCATACTTACTGACAGCCAGACCTG10.9708737864077669No Hit
TATAAAAAAAGAACCAAATAACTTCCAACATTTTAATAAATATCCAAAAA10.9708737864077669No Hit
CTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAA10.9708737864077669No Hit
ATTGATGGCCATCCGAATTCTTTTATTCTCTCCATATTGACTGTCTCTTA10.9708737864077669No Hit
CTCAAAGGGACTGTTAGCACGGTGGAATAGTAGGGCTTTATTAACTAGAC10.9708737864077669No Hit
GGACAAACCCTCTGGAGCAAAACAAACGATGCTGGATCAGACCGAGTGAT10.9708737864077669No Hit
GCATCTTCCTCAGGATATTGTGGGCCAGGTTGAGCTGCATGAGGTTCTTG10.9708737864077669No Hit
GGGTAGGGGTGGGTGGCTGAGAACAGATGGCACTCAGCTAGCTTCTCTGG10.9708737864077669No Hit
GTAAAGAGTTCAACCACCTGGAAAAAAGAATAGAGAATTTAAATAAAAAA10.9708737864077669No Hit
ATAACTATAATGGGCAGATCACGAAAAAATAAGCAAATTAGTACTGTATT10.9708737864077669No Hit
GGCGAAAAATAAGTCAGGCCAGAAGAGGGTCTCTGTCATACTGTCCCTCG10.9708737864077669No Hit
GTATGTTAATTACACTGGAATTAAAAACAAAGATATGCATCTTGGAGACA10.9708737864077669No Hit
CAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCA10.9708737864077669No Hit
GACTGAAGATCCAGATGAAGGCACATCTGGGGTGGAGTCTGCTGTCCTGA10.9708737864077669No Hit
GTAGAAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATC10.9708737864077669No Hit
GGTGCAGAAGCTGGATTCTCCTCCGGAAGAGCACGCAGAAGCTCCAGGAA10.9708737864077669No Hit
TCGTTTGGATGCCTATTTTAAAAATAAAACTGCACAAATTCACCAATACA10.9708737864077669No Hit
TCATTTTACTGATTTCTATGTTCATTGGCTTTTGGTCCATCTTCCCTACT10.9708737864077669No Hit
GTAATATATATTTTGGAAAACAGAAAATGTAAGTGCGTAACTGTAGCAAG10.9708737864077669No Hit
GTCTGGCCATTGCCCGGGCCCTTGTGCGGAACCCACGAGTCCTCATCCTG10.9708737864077669No Hit
TCGCGGGTGGGGGGCGGGGTGGGGGGTGGCGGTGGGGGTGGGGGGTTGGG10.9708737864077669No Hit
CCTAAGCTGAAGTTAGATGCTTAACTGACTGGAGTCAGCCAGGCACCCTG10.9708737864077669No Hit
ACGTGGGGAAGGGCCATTCAGTCAGTTTGTCAACGGGTAGTTCGTGTGGT10.9708737864077669No Hit
GAGCAAAACAAACGATGCTGGATCAGACCGAGTGATGGTATCACCTCTGG10.9708737864077669No Hit
CTCAGGACAGCAGACTCCACCCCAGATGTGCCTTCATCTGGATCTTCAGT10.9708737864077669No Hit
GCATTAAGATGTATGAGGTGTATTCCTTCCCCATCTTGGGAATTCTAGTT10.9708737864077669No Hit
CCATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGG10.9708737864077669No Hit
CTTCAACTCAGTAATTGAGTTATCTTTTATTGCTTATTTGGTCACCACTT10.9708737864077669No Hit
CCCCTTCCCTGCCCAAGTTCAAAACTGGCCTCGACTTACCTTTTAATCCT10.9708737864077669No Hit
AATGTGAACAGTTATATTGGCAAATGAGTAAAAAGTCAAAAAGTGGTGAA10.9708737864077669No Hit
GTGGTGTCCGCAGTCCTGGATGACCTCTTGGGAAGTTACCCAGCTTTCTT10.9708737864077669No Hit
TAATCACCTGATGTAAAAATCCAGTGACAACACTGACAAGCAAGTTGATC10.9708737864077669No Hit
GTCTTGGGCGCGAGCGCGCGCGGGCCGCGGACTGCCCGAGCGCGCGGGGC10.9708737864077669No Hit
GAAATATGCTAGGTTACCAAGTTCGGTGACAAGGAGGCAGGAGGTAAGGC10.9708737864077669No Hit
GGCCAGAGCAAGGAGGGTAGCCAGCTGTGAGGATTTGGGGCCCCAAGAGC10.9708737864077669No Hit
CCACAAATGTATACTGCGGGGCGCCTGGGGGGCTCAGTCGGTGAAGCGGC10.9708737864077669No Hit
ATCCCAGGACCCTGGGACCATGACCTGAGCCGAAGGTGGACACTTAAACC10.9708737864077669No Hit
GTCCTAATTAAGAGTTATGTTTGTGAATGGGACAAATTAATTGATAATGG10.9708737864077669No Hit
CTCGATGCCAGAACCCTGAGATCATGACCTGAGCTGAAGGCAGATGTTTA10.9708737864077669No Hit
GGGGTGCGCCAGCCCGCGCACCAGGCCCCCACCGCCCTCCAGCCCCCCAG10.9708737864077669No Hit
GGGTGAGGGAATGGGGTAACTGGATGATGGACATCAAGGAAGACATGTGA10.9708737864077669No Hit
TGGAAGAACCAAACTGGAAAGACTTGGCTAAGAAAAAAAGAATCCAATCT10.9708737864077669No Hit
GTCGTCACCCTGGCGGTGGGTGTTAGGGTGTCGCGGGCGCTGGGGCGCTG10.9708737864077669No Hit
GGGGAGGGGGTGGCAGTAACCAGGAGCGGCATGAAGGCCTCCAGAATGGG10.9708737864077669No Hit
TGGAAGGATTCATGCACCACCTCAGAGGAATCTTGCCAAGTAGCATCTTA10.9708737864077669No Hit
ACACTGTAGATACCCATTAGAGCACAACCAGAAACTGATTGCCCCCAGGG10.9708737864077669No Hit
GCTGAAACGAGAAAGCTCTTATCTCTTGTTCTACTTCAAGCAGTAGTTGT10.9708737864077669No Hit
GCCTTGGGAGGCTGGCTTCCTGCATTCCGCAGGGGAAATCACCTCCAGAG10.9708737864077669No Hit
CCTTAGTGGCTCAGCCATTAAGCTTCTGCCTTTGGCTCGGGTCATGATCC10.9708737864077669No Hit
GCCTTTCTCTCTGTGGTGCATATAAATGGTCCGGTCGTTGGCATCTTAGA10.9708737864077669No Hit
GAGTAGGATTACCAGTGTTGTTGACGAGGAAGATATTTAACTGTCTCTTA10.9708737864077669No Hit
TGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACTTG10.9708737864077669No Hit
GGGAGGTGTGAGAGGGAGAAGCAGGCTTCACACTGTGCAGGGAGATGGAT10.9708737864077669No Hit
GGCTCGATCCCAGGACCCTGGGATCATGACCTGAGCTGAAGGCAGATACT10.9708737864077669No Hit
GTACTGTGCCACTATTGAATTGAATAAGTTCATTGCTGTCTCTTATACAC10.9708737864077669No Hit
GTTGCGGGGTATCTGCCTTCAGCTCAGGTCATGATCCCAGGATCCTGGGA10.9708737864077669No Hit
GATTAGCAGTGCTGCTGGTTAGAGCGCCGGCCTCGAAGGAAGGGAAGTAG10.9708737864077669No Hit
GTGCAGCTGTCAGCCCATCCACCCGAGCGTCCTCACCCTGTCAAACAGAA10.9708737864077669No Hit
GAGCAAAAGCAGGTCAATTATATTCAATATGGAGAGAATAAAAGAGTTCG10.9708737864077669No Hit
GTGCAGAGCCCGGGGGCCCTGCCTACAGGCGGTCTGGGGCTTCGCAAGAG10.9708737864077669No Hit
GCAAAAGCAGGAATGGGTCTTGAAGAAATGGAGTTGACACAAGTAGTCTT10.9708737864077669No Hit
ATGTAAATAGTCAAGTGACTGATGTCGGACAAACATGCTGACTTTACGTA10.9708737864077669No Hit
GTGGAGTAATATGTTGAAGTGGGAAAAAACTGTCAACTCAGAATTCCATA10.9708737864077669No Hit
GGTCAGGATATGCAGCCGACCTGAAGAGCACACAGAATGCCATTGACGAG10.9708737864077669No Hit
ACTCTGGCCTGTTGGGGCTCCAGGATGGGACTGGCCCATGCAGACAGTGG10.9708737864077669No Hit
GCTTAATTTTTCAGATGTGCCAATGATTTTACAAAATGCTAGTGAATACT10.9708737864077669No Hit
GGCTACATCCCAGGACCCTGGGATCATGACCTGAGCTGAAGGCAGACTGT10.9708737864077669No Hit
CATTAGAAATATAATTGGCAACATAGGTCAGTCTTAAGAACTGTCTCTTA10.9708737864077669No Hit
CATTTATTGAGTACACTATAGATGCCAAGCATGGAATTACTTTACATACA10.9708737864077669No Hit
TACTAACACGCGTGCGGGAGGGGGGTTGTCACTGGCGTGGGCTGTGTCTG10.9708737864077669No Hit
GAGTGAGCCAAAGGCAGATGCTTAACTAACTGAGCCACCCCCCTACACCC10.9708737864077669No Hit
GGGGGAGTGGGAGGAGGAGAAGCAGGCTCCCCGCTGAGCCTGTCTCTTAT10.9708737864077669No Hit
TTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTGGGCCATATTATTCT10.9708737864077669No Hit
GGCCATAGGTGCTCATTCGAGTTCCCAGGGAACGTTGGCCATATCTACTT10.9708737864077669No Hit
CTCTTAGTAATCAAAGTTTCCCATTATGCAAGTCATCTAGAAGGTTAACA10.9708737864077669No Hit
CATCCCCTCCGGCCTTTTGAAAAGCATCAGGTAGGTACCCTTTGGGTGCT10.9708737864077669No Hit
GGTCAAGATACCCCGGTTAAAAGACATACATGATAGGTTGCATGTACGAG10.9708737864077669No Hit
ACTTAATCTTATCAACAAGGAGACAACAGCCAAATTATTGAGCTGCCTAC10.9708737864077669No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA10.9708737864077669No Hit
TGGTAACAGAGACTAGACTCTTCCCATCAAACTCCTTGAGTTGCTGCACG10.9708737864077669No Hit
ACCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCA10.9708737864077669No Hit
CTCATTTCCTGCCCTGCGCCATTTATCCTGGTAGCAACATTATCCCTGTC10.9708737864077669No Hit
GAGCAAAAGCAGGTCAATTATATTCAATATGGAGAGAATAAAAGAACTGA10.9708737864077669No Hit
CAACTAGGTGGCTCAGTCGAGTGTCTGCCTTCACCTCCGGTCTTGTTCCC10.9708737864077669No Hit
AAAAACAAAAGATAAACACAATATTAGAACATTTACATAATCATAAAACA10.9708737864077669No Hit
GTTCTGGAAAAGCACTTTTGCATCTTTTTGGAAATGCCTCAAGAGTTGGT10.9708737864077669No Hit
GCCTCGCTCGCCAATAAAATCCATCACAAATAGCACTTCATCCTCGCTGT10.9708737864077669No Hit
GAAGAAGGCAGAAGACGGAGAACTGTCAGGAAACAAACTGACGTTAGATA10.9708737864077669No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)