FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_D7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_D7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4082
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACCAT210.514453699167075No Hit
TGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACTTG200.4899559039686428No Hit
GCATTAAGATGTATGAGGTGTATTCCTTCCCCATCTTGGGAATTCTAGTT140.34296913277804997No Hit
GTATTTACATGTGTAATCACCTTCCAGATCATGATATAGAATACTTAAGT120.29397354238118567No Hit
GTGCTGATTTGTACCATTATCAATTAATTTGGCCCATTCACAAACATAAC100.2449779519843214No Hit
ATGTATGAGTTACTAATTTCCTGGACATTATCAGCCATTAGCTGGTTTCC100.2449779519843214No Hit
ATCCTCTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATCCTA90.22048015678588928No Hit
GGATAGGACAGGGTTGGTTATTGACTGAAACTGGGGATGAGGTAATGCTC90.22048015678588928No Hit
GTGTATGGTTAGGATTTGCATCTTTCACTTGCTGAATGTAAGAAGCACCA90.22048015678588928No Hit
ATACTTAAGTCAACAAAGAGCATTACCTCATCCCCAGTTTCAGTCAATAA90.22048015678588928No Hit
TCATGATATAGAATACTTAAGTCAACAAAGAGCATTACCTCATCCCCAGT90.22048015678588928No Hit
CAATTATACCTAACCACAGACTGGAATTTCCTTAATAAAATGCATTGTTG90.22048015678588928No Hit
CTCTTAATTAGGACAGAGAAAATTGGGTTGTTTGTCAGGTTGTCTTCATA80.19598236158745713No Hit
ACACTATAGATGCCAAGCATGGAATTACTTTACATACATCATCTCCATTT70.17148456638902498No Hit
TAATAACACTCCATCAGTAGTTCTTTTGTCAAATGCATATGAGAAAAGGC70.17148456638902498No Hit
GTCCTAATTAAGAGTTATGTTTGTGAATGGGCCAAATTAATTGATAATGG70.17148456638902498No Hit
TTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACCATACACAGGCAG70.17148456638902498No Hit
ACAAAAGACTGATCAAGAGATTGAAGCAAGAAGGGGAAAAGAAACCTATA70.17148456638902498No Hit
GTACACTATAGATGCCAAGCATGGAATTACTTTACATACATCATCTCCAT60.14698677119059284No Hit
TGTTTGAAATGTGCAATATTGGCAATCAAGACTTACCTCAGCATTTGCTG60.14698677119059284No Hit
GTTACATATGTGTCTTGCTCTGACATTTCAAGTCCTATTTTTAACAGGAT60.14698677119059284No Hit
GTACAAATCAGCACAGAGTTTTCCAAGGATAGGACAGGGTTGGTTATTGA60.14698677119059284No Hit
ATAGATGCCAAGCATGGAATTACTTTACATACATCATCTCCATTTCACAG60.14698677119059284No Hit
GAGCATTACCTCATCCCCAGTTTCAGTCAATAACCAACCCTGTCCTATCC60.14698677119059284No Hit
TTATAAAAGAAGTCAAAGGCGGTCTTGAATAAGTGGAAGGCTTCTGCCAG60.14698677119059284No Hit
GTCCTATCCTTGGAAAACTCTGTGCTGATTTGTACCATTATCAATTAATT60.14698677119059284No Hit
GGGTTGGTTATTGACTGAAACTGGGGATGAGGTAATGCTCTTTGTTGACT60.14698677119059284No Hit
GTCAATAACCAACCCTGTCCTATCCTTGGAAAACTCTGTGCTGATTTGTA60.14698677119059284No Hit
AGTCAATGGTATTACCATAGTGGTGTATGGTGACAGACGGTGGCTCCTTT50.1224889759921607No Hit
TATCTGAACTCCTGCTGTGGAATGTGTAGCAAGTGAATTAACTAACCCCT50.1224889759921607No Hit
CTATAGTGTACTCAATAAATGTGAACTGTTTTATTGGCAAATGAGTAAAC50.1224889759921607No Hit
ATGCAAATCCTAACCATACACAGGCAGATGAGTATTTACATGTGTAATCA50.1224889759921607No Hit
TACACAGGCAGATGAGTATTTACATGTGTAATCACCTTCCAGATCATGAT50.1224889759921607No Hit
ATAGAATACTTAAGTCAACAAAGAGCATTACCTCATCCCCAGTTTCAGTC50.1224889759921607No Hit
CTATAGATGCCAAGCATGGAATTACTTTACATACATCATCTCCATTTCAC50.1224889759921607No Hit
GGCCAAATTAATTGATAATGGTACAAATCAGCACAGAGTTTTCCAAGGAT50.1224889759921607No Hit
ATATCATGATCTGGAAGGTGATTACACATGTAAATACTCATCTGCCTGTG50.1224889759921607No Hit
GTTCTATGAAGACAACCTGACAAACAACCCAATTTTCTCTGTCCTAATTA50.1224889759921607No Hit
GTGATTACACATGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCA50.1224889759921607No Hit
ACATAATGGCATACAAAAGACTGATCAAGAGATTGAAGCAAGAAGGGGAA50.1224889759921607No Hit
TATCAAAACTTATCAGCTGTAGATAAAGCTGTCTAGAGGAAATTGTATAG50.1224889759921607No Hit
ATTTTTAACAGGATCAGCACTGGAGGAACGCAACAATGCATTTTATTAAG50.1224889759921607No Hit
ACCTAAGACATAATAACACTCCATCAGTAGTTCTTTTGTCAAATGCATAT50.1224889759921607No Hit
TACTCATGCTGTCTTCAACCAAACTTCCAAAATTTTAACAAAGGGTTTCA50.1224889759921607No Hit
CCTAAATTCCGTATGGGAGCTTCCTGGTAACTCGTTCTGTTCCCTAATAC50.1224889759921607No Hit
GGCCCTAAGAACATGCAGGAAAAGAGAGTGGCATCTTCAACAAATGAATA50.1224889759921607No Hit
AATTAAGAGTTATGTTTGTGAATGGGCCAAATTAATTGATAATGGTACAA50.1224889759921607No Hit
GTATAATTGGGATTAATTGTTCTATGAAGACAACCTGACAAACAACCCAA50.1224889759921607No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)