FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_D6_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_D6_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1176
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCCATCAATTA40.3401360544217687No Hit
AAGCGAGGGAGGCCATGAGGGCAGAAAACGAGCACTGTCTTCCTTGCACC30.25510204081632654No Hit
GAGCAAAAGCAGGGACTTTTGGGCAGCATTAAGATGTATGAGGTGTATTC30.25510204081632654No Hit
GTCTTGCTCTGACATTTCAAGTCCTATTTTTAACAGGATCAGCACTGGAG30.25510204081632654No Hit
GAGCATTACCTCATCCCCAGTTTCAGTCAATAACCAACCCTGTCCTATCC30.25510204081632654No Hit
CTCTCTCTCTAGGCAATGCCACATCCTAACCTGTCTCTTATACACATCTG30.25510204081632654No Hit
GGGAGCAACTGGCAGAGGGACAAGAAGTAGACTCCTGGCTGAGTAGGGAG30.25510204081632654No Hit
GTAGGTTATTTTTGGTTCACAGGATATCATTTGCGAACCTGTCTCTTATA30.25510204081632654No Hit
CTATCAAATTACAGTCCCACCAATGACATAATCTGTCTCTTATACACATC30.25510204081632654No Hit
GAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAG30.25510204081632654No Hit
CTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACCAT30.25510204081632654No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT30.25510204081632654No Hit
ACATTCAGCAAGTGAAAGATGCAAATCCTAACCATACACAGGCAGATGAG30.25510204081632654No Hit
GACTTCAGATAGGTAAGTCTCCATGAATGATGTCCAAGTCAGTAGTTCAA20.17006802721088435No Hit
CCTATCTACTGGGATGTAAAGTGTTAATCGCGGGGCTCCTTGCTCCCCAG20.17006802721088435No Hit
TAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCT20.17006802721088435No Hit
CCCCAGGCGCCCCTGATTATTCATTTGTTGAAGATGCCACTCTCTTTTCC20.17006802721088435No Hit
GAACTACATTTCCCAGAGAGCTCCACGGCAGCCAAGGGTGCCGGACGCCC20.17006802721088435No Hit
ATTTACCCTTAGTGGAATTCATTGAGCTTCTTAGAGCTATTGATGCTGTC20.17006802721088435No Hit
ACTCAGCATTGCTTGGCCGCTTTCACTTCCCTGTCCCTTTTCCTCAACTT20.17006802721088435No Hit
GAATTGTATAGAGCAGAATCCACATAGATGTGTGCTCTCCCTGTCTCTTA20.17006802721088435No Hit
CTACTCTCAAGTTATCAAAGGTTCTTCTGTTAAAAGTGCTGTCTCTTATA20.17006802721088435No Hit
CATGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACT20.17006802721088435No Hit
ATACTATAGGCCCTGTACAGACAACCACAAGCCCTGTCTCTTATACACAT20.17006802721088435No Hit
GTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGA20.17006802721088435No Hit
GTTGTCGAATAGTTTAAAAACGACCTTGTTTCTACCTGTCTCTTATACAC20.17006802721088435No Hit
TGCAAAGGGTTTGTTTTCCAAGGGGAATACAGATGTGCAAGCTGTCTCTT20.17006802721088435No Hit
GCAAAAGCAGGGGATGGTGAAAGCCCCAAGGTAAATCTGAAGACTGTCTC20.17006802721088435No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGCTGTCTCTTATAC20.17006802721088435No Hit
ACATCAGGCATTTTTCTCAATGACTTCAGATAGGTAAGTCTCCATGAATG20.17006802721088435No Hit
ATCATGACCTGAGCCAAAGGCAGAGGCTTAACACACTGAGCCACCCCTGT20.17006802721088435No Hit
GTATAGTGACTCAGCAGTTACTCAGAGCTTCTCACAGAAAGTGTACTCCT20.17006802721088435No Hit
ATCATGACCTGAGCCAAAGGCAGACACTTAACCGACTGAGCCTCCTAGGC20.17006802721088435No Hit
TGTTTACCTAGTAGAGCATGTTCCTACTTCAAATGCTGTCTCTTATACAC20.17006802721088435No Hit
CTGTCATTGTCTTACCTGGATGCATGTCCCCGACAGTCTCCAGCCTTGTT20.17006802721088435No Hit
GTGATAAGACTAGATATTTCAAGGCTCCACAGCATCGACTTCAATCAGCT20.17006802721088435No Hit
ATCCAGAGCTGGGACCATGAAGCCATGGGCTGACTAATCAGAGGTAGAAC20.17006802721088435No Hit
GTCGGGGACATGCATCCAGGTAAGACAATGACAGGAGCTGAAGTAAGTTC20.17006802721088435No Hit
TTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTGGGCCATATCTCCTG20.17006802721088435No Hit
GCTGTGTTATACGCTACCCACTTGTCTTTACATCGGATAATTAACCTGTC20.17006802721088435No Hit
AAGCAGGGGAAGGCGAGGCGGGCGAGCATCCCGAGCGCCCAGGCTACCGG20.17006802721088435No Hit
CTCCATTTATTTAGCAAAGGGGAGGCTATTAGTAACTTTGAAGAACAGTT20.17006802721088435No Hit
GATATGCATCTTGGAGACACTCATGAGCAAACCGCACATCAGAGGAATTA20.17006802721088435No Hit
GTATGGATAGTTTCTGTCTTCAAGTGCCTTGAGCTTTTCTTTTATGGTCT20.17006802721088435No Hit
TGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACTTG20.17006802721088435No Hit
GTTTTAGGATGGGGAGACCCAGACTCTGGGTGTCAGACTGAGGGAGGGAG20.17006802721088435No Hit
AACTGAAACAGGAAGAAATAGAAAATCTGAATAGACCCATAGCCAGAAAG20.17006802721088435No Hit
CTCAAACTGAGAGTCGTTAACCAGCGAGGCCAGCTGCCTGTGTTTCTTCT20.17006802721088435No Hit
GTCTGCTTCCCTGCACCCTCCCACACAGCACCAGTGTGTGGTGGTGACCT20.17006802721088435No Hit
GTGCTGATCCTGTTAAAAATAGGACTTGAAATGTCAGAGCAAGACACATA20.17006802721088435No Hit
ATTTGAGAGAGAGGGAGACTGAGCATGAGCAGGGGAGGGGCAGAGAGCTG20.17006802721088435No Hit
GCTGTGTTATACGCTACCCACTTGTCTTTACATCGGATAATTAACTCCTG20.17006802721088435No Hit
CTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGA20.17006802721088435No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGC20.17006802721088435No Hit
CTCTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACC20.17006802721088435No Hit
AATCCTCGCTGGGCAGTCGCCTTCACTTCTCGGCACTCCGAGCCCCACCC20.17006802721088435No Hit
AGTCGGAACCACTGTGCAATCCTGCCAGCAAATGGGGGTCAAGGGGATGT20.17006802721088435No Hit
TGATGGCACTTTGCTGAGTTCAGTAGTCAGAAGTCTGTTGGAGAAGATTT20.17006802721088435No Hit
GACGATTACCTGGCTACTGGGGCTTCTGGAGGGTGAAATGCTTAAACATG20.17006802721088435No Hit
GAGCAAAAGCAGGGAATGAAGGGGGGACTGGGGCTCTCTCAGGAAACTTC20.17006802721088435No Hit
AGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTA20.17006802721088435No Hit
GGGAGAGGGAGAAGCAGGCTCCCCGCTGAGCAGGGAGCCTGATGCAGGGC20.17006802721088435No Hit
GCCCGTGTCAGGATTTCCATCCATCTGAAGACCAAGTAATATGCCATTGT20.17006802721088435No Hit
CTCCCGCTCACAGACCAGGTCTCTGTCATCAAGGTGAAGATTCACGAAGC20.17006802721088435No Hit
ACCCCAAAGAGGCTCTAGAAAAGCAAGCTGTTACTGTAACGATCACTTCC20.17006802721088435No Hit
GAGCAAAAGCAGGGGAAGTGGGAGAGGGAGAAGCAGGCTTCTCACGAACA20.17006802721088435No Hit
GCCATTGAACTCCGCAGAGAAAGTTGTCCCCGAGTTTCTGCCCTTCAGGC20.17006802721088435No Hit
GTCAGGAAACAAACTGACGTTAGATAATCTGGCAGAAGCCTTCCACTTAT20.17006802721088435No Hit
GTACAAATCAGCACAGAGTTTTCCAAGGATAGGACAGGGTTGGTTATTGA20.17006802721088435No Hit
GTTTTGTTTTGGTCTTTTGGTATAAGTTTCCTTAATTTGCTCTGTCTCTT20.17006802721088435No Hit
GACCTGACAGCAAGTTTCTCTTCTCTACTTCTTCCTGTCTCTTATACACA20.17006802721088435No Hit
GCAAAAGCAGGCAAGGGCCCCGAGCCATGGAAAACAGTCGACAGCCCAGA20.17006802721088435No Hit
TCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACA20.17006802721088435No Hit
CCAGTAGTCCTGGGATCAAGCTCCGTATTGGGCTCCATGCTTGGTGGGGA20.17006802721088435No Hit
ATATCATGATCTGGAAGGTGATTACACATGTAAATGCTCACTGTCTCTTA20.17006802721088435No Hit
CTTGTATACCCATGTTCATAGCAGCATTCCTCCAAATAGCTAAAAGGTTA20.17006802721088435No Hit
GGTTAAGCATCTGCCTTCGCCTCAGGTCACAATCTCAGGGTCCCGGGATG20.17006802721088435No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA20.17006802721088435No Hit
CATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAAT20.17006802721088435No Hit
AGTATGAATCAACAGCCAGCTGTGTTCCAAGTCGCTAAGTGACAGCACGT20.17006802721088435No Hit
TTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACCATACACAGGCAG20.17006802721088435No Hit
GAGCAAAAGCAGGGAAAAAAATAAGTCGATAGACTGTCTCTTATACACAT20.17006802721088435No Hit
GCCCAGAACCAACCCACACACCACCACCTAAACAGCTGTCTCTTATACAC20.17006802721088435No Hit
AGGTGGCACAGGAGGTCCTTTAAACCTAATCCTCGCTGGGCAGTCGCCTT20.17006802721088435No Hit
GGTTAGGATTTGCATCTTTCACTTGCTGAATGTAAGAACTGTCTCTTATA20.17006802721088435No Hit
GTCTTCAAGTGCCTTGAGCTTTTCTTTTATGGTCTCTGTTAAGGCTGTCT20.17006802721088435No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT20.17006802721088435No Hit
GTTCTGTTCCCTAATACTCATGCTGTCTTCAACCAAACTTCCAAAATCTG20.17006802721088435No Hit
CCTCTAAACTTAAAAATCACAATCTAAAACAACATCCTGTCTTTTCTTCT20.17006802721088435No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)