FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_D6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_D6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4010
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTATGAGTTACTAATTTCCTGGACATTATCAGCCATTAGCTGGTTTCC120.29925187032418954No Hit
GTACACTATAGATGCCAAGCATGGAATTACTTTACATACATCATCTCCAT110.2743142144638404No Hit
ACTTTACATACATCATCTCCATTTCACAGATGAGCCTACTAAAGCTAAAA110.2743142144638404No Hit
ATATTAAATTCAGGTTCTCAATAATGGTCAACAGGAGATTGTACCCATGA100.24937655860349126No Hit
GGTTAAAGGTATGAGCATATCTGAACTCCTGCTGTGGAATGTGTAGCAAG100.24937655860349126No Hit
GCATTAAGATGTATGAGGTGTATTCCTTCCCCATCTTGGGAATTCTAGTT90.22443890274314215No Hit
CTATAGATGCCAAGCATGGAATTACTTTACATACATCATCTCCATTTCAC90.22443890274314215No Hit
GAGCAAAAGCAGGCAAGAAAATACCACAATAATTGGTGTCCTTTGTTAAG90.22443890274314215No Hit
GGTATGAGCATATCTGAACTCCTGCTGTGGAATGTGTAGCAAGTGAATTA80.199501246882793No Hit
CTATTATGTGTCCTAGAAACCTATGAACCATGTTTAAGCATTTCACCCTC70.1745635910224439No Hit
CATTTATTGAGTACACTATAGATGCCAAGCATGGAATTACTTTACATACA70.1745635910224439No Hit
CTATTCCACCGTGCTAACAGTCCCTTTGAGAACTCAGCCATCCATTACAC70.1745635910224439No Hit
ATTATGTCTTAGGTGGAGGAAATGGTCTACGGATTCATGTTTGAAATGTG70.1745635910224439No Hit
CAATAAATGTGAACTGTTTTATTGGCAAATGAGTAAACAGTCAAAAAGTG60.14962593516209477No Hit
GTTTCTAAATACTTGGAGGGTTTTCTAAGTGTATTTCCCTTACTGAGTTG60.14962593516209477No Hit
ATGTATACACCATGTTTTGTTTATCCATTCATCATCAGAGCACATTTGGG60.14962593516209477No Hit
TACATAACCACTGTACTTCCCTTCCTTCCTAGTCTAAAAGTATTGCTCTT50.12468827930174563No Hit
GTGTTATTATGTCTTAGGTGGAGGAAATGGTCTACGGATTCATGTTTGAA50.12468827930174563No Hit
GTGTACTAGTGTAATTATGCGGGTGAAACCCTTTGTTAAAATTTTGGAAG50.12468827930174563No Hit
GAATTAACTAACCCCTTTTAGCTTTAGTAGGCTCATCTGTGAAATGGAGA50.12468827930174563No Hit
CCCCAGTAGCTAGGTAATCGTCAAGGTTTCCCTTTAGCCTAGGGGTTAAA50.12468827930174563No Hit
GTAATTATGCGGGTGAAACCCTTTGTTAAAATTTTGGAAGTTTGGTTGAA50.12468827930174563No Hit
GCTGTGGAATGTGTAGCAAGTGAATTAACTAACCCCTTTTAGCTTTAGTA50.12468827930174563No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG50.12468827930174563No Hit
CTGTACTTCCCTTCCTTCCTAGTCTAAAAGTATTGCTCTTCGACTAACTA50.12468827930174563No Hit
GTATTAGGGAACAGAACGAGTTACCAGGAAGCTCCCATACGGAATTTAGG50.12468827930174563No Hit
CATCTGTGAAATGGAGATGATGTATGTAAAGTAATTCCATGCTTGGCATC50.12468827930174563No Hit
CATAACCACTGTACTTCCCTTCCTTCCTAGTCTAAAAGTATTGCTCTTCG50.12468827930174563No Hit
GTGTAGCAAGTGAATTAACTAACCCCTTTTAGCTTTAGTAGGCTCATCTG50.12468827930174563No Hit
CTCATACATATGGTAAATGTTCCATTCCCAGCCAAATGATTTGTGTAATG50.12468827930174563No Hit
CATCATCTCCATTTCACAGATGAGCCTACTAAAGCTAAAAGGGGTTAGTT50.12468827930174563No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)