FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_C8_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_C8_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAATTGGGATTAATTGTTCTATGAAGACAACCTGACAAACAACCCAA13.571428571428571No Hit
GTCCCGGGATGGGGCCACACATCGGGTTCCTTGCGCCATGGGAAGTCTGA13.571428571428571No Hit
CTAATTATCTATAACATAGCCATCATCCACAACAATCTCACAGCGCGCTT13.571428571428571No Hit
GCAAAAGCAGGGGAATCAGGATTAGGTAGGAAGCTGTCTCTTATACACAT13.571428571428571No Hit
TAGTGGGAATGATCATTGTCAGTAACTTTAAAAGCCATTGCCTGGCAAAA13.571428571428571No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT13.571428571428571No Hit
AGGATAAAGGGAAACCTTTACGATTACCTAGCTACTGGGGCTTCTGGAGG13.571428571428571No Hit
CCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCTTTT13.571428571428571No Hit
CAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACCTGTCTCTTAT13.571428571428571No Hit
CTATTCCACCGTGCTAACAGTCCCTTTGAGAACTCAGCCATCCATTACAC13.571428571428571No Hit
CTCACCGACTCTGTACACACCAACAGGACAGCACAAAAAGACCTGGTCCC13.571428571428571No Hit
GCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTC13.571428571428571No Hit
CTCATACATATGGTAAATGTTCCATTCCCAGCCAAATGATTTGTGTAATG13.571428571428571No Hit
GTATGATTGTGTGCCGTGTGAGTTTGAGGTACAAGACGACGGACCCTTTC13.571428571428571No Hit
TCCTTGTACATTCCTCACTGGAATCATGTCAATTAATATCTTGTCTGCTG13.571428571428571No Hit
CTCTTGTACAGGGTGTGCAAATTCCTTCTTTTAATGACACTACCCCTGTC13.571428571428571No Hit
ACTTCAAAGATTTCTGCTATTAGAATAAGGTTCTGTTTTGTTAAGGTGGC13.571428571428571No Hit
GGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGA13.571428571428571No Hit
TTAGTAACTCATACATATGGTAAATGTTCCATTCCCAGCCAAATGATTTG13.571428571428571No Hit
GCTTCAATCCAATGATCGTCGAGCTTGCGGAAAAGGCAATGAAAGAATAT13.571428571428571No Hit
ATATAAGTGAGAATCTCGCGAATTCGGTACTGAGACATAAGATCAATAAT13.571428571428571No Hit
CTCAACAACTGTAAAGAGAGTTAAGGACACATTTAGAGAGACTGACAAGG13.571428571428571No Hit
GGGAAAGGGAGAAGCAGTCTCCCTGCTGAGCAGGGATTACCAATGAGGGG13.571428571428571No Hit
TTGTTAAGCGCTATTATGTGTCCTAGAAACCTATGAACCATGTTTAAGCA13.571428571428571No Hit
TTAAAGATGGGCAGAACACATGAACAGACATTTCTCCAAAGAAGACATAA13.571428571428571No Hit
GGACGGAAAAGACACAATTAAATACAGAACACCCATTCTAACTATACCAA13.571428571428571No Hit
ATGTTACGGCCAGAGGTGATACCATCACTCGGTCTGATCCAGCATCGTTT13.571428571428571No Hit
GAGCAACTAGACAGAGATGGTAAACCATCCACCCACCCCGGGATAAAGAC13.571428571428571No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)