FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_C7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_C7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2438
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGGAGACAGGAAACGGCAAAAACGGCAGTGGCTGAGACCTGACAGCAA50.20508613617719443No Hit
GTAATTGGCATTCCACAATGCACATATTTCAGGTGGATAACCTGTCTCTT50.20508613617719443No Hit
ACTCTGAACCACGATCGGTGACCGCGGGGTTCTTCGGGGTTCTTCGGGGT40.16406890894175555No Hit
CTTTTATAACATGCACTCTTTTTTATGATAGAGGCACTGAAACTAAAGAA40.16406890894175555No Hit
GCCCAAGAATATGGCGCTGGCACTTACGGGGCTAGTAGCACCACCTCAAC40.16406890894175555No Hit
GAGTTGGAATCCTTGATGAAAATGCCCTCATACTGCAGCTTCTGTTTCCC40.16406890894175555No Hit
ATATATGACAGAGCCTATTGACGAGTACTGCGTGCAGCAACTCAAGGAGT40.16406890894175555No Hit
GTCCATCAAAGTCCAAGTGCCCAACATGCAGGATAAGACTGAATGGAAAC40.16406890894175555No Hit
CAATTATACCTAACCACAGACTGGAATTTCCTTAATAAAATGCATTGTTG40.16406890894175555No Hit
CAATTTTCTCTGTCCTAATTAAGAGTTATGTTTGTGAATGGGCCAAATTA30.12305168170631665No Hit
GGGAAGCCAGTGGATAACACCTACAACTGGGAAAAAAAAAAAAAATCAAG30.12305168170631665No Hit
GGCATATCCGCAAGCGATTTGCAGACAATGGATTGGGTGATGCCCCATTC30.12305168170631665No Hit
GTACTACTTATTGAAGAGACTGCCCTTTTCCCCATTATATATTCTTGGCT30.12305168170631665No Hit
GTTCAATGGCTGAGCCAAGCCTTGAATGGCATGTCAGGTAGGCCAGGAAA30.12305168170631665No Hit
GGGTATGCCTGCAGGGAAACAGAAGCTGCAGTATGAGGGCATTTTCATCA30.12305168170631665No Hit
GTATAATTCTTTGTACAGAATCAGGAAGACGGCATCGTTGCCAACCTGTG30.12305168170631665No Hit
GGGTTTACTTAATTATCAGATGGTCTAGGAGAGCCTGAAATCCAAACCAG30.12305168170631665No Hit
AAACAAGGGCAAACCTTCAAGCCACAGCATTGCCACGGCTGTCCTGTAGG30.12305168170631665No Hit
GTGTGGCACAGTGGTAGTGGCCGTGGGCTCTGACGGCACCCGGGTCTGGG30.12305168170631665No Hit
CAAGGAACGGGAATGTTGTTACATATGTGTCTTGCTCTGACATTTCAAGT30.12305168170631665No Hit
ACACTATAGATGCCAAGCATGGAATTACTTTACATACATCATCTCCATTT30.12305168170631665No Hit
GTATTTACATGTGTAATCACCTTCCAGATCATGATATGGAATCTGTCTCT30.12305168170631665No Hit
TCACACTCCCGCTCACAGACCAGGTCTCTGTCATCAAGGTGAAGATTCAC30.12305168170631665No Hit
AGGTATGAGCATATCTGAACTCCTGCTGTGGAATGTGTAGCAAGTGAATT30.12305168170631665No Hit
AGATAGGGCAGCGGAGCACCTGAGGAGGGCGGGGCTCCCAGCAGTTGGGC30.12305168170631665No Hit
GGAAAGGAAGAAAGGGTTTAGTAAGAAAGGAGTGGGAGAGAGAGATGGTA30.12305168170631665No Hit
GCTCTTCCACTGTTAAACAAATTCTGGTCCGTCCCTCATTCATCAGACCC30.12305168170631665No Hit
GTCTTAAGAATATGCTGTTAAGAGAACAAGATAAAGGGTGAGTGGGAGAG30.12305168170631665No Hit
GTTGTGACATCAGTGGCTGTGGCTGCTGCCCAGACCGGCCTATCCCACTA30.12305168170631665No Hit
AGTAGAAACAAGGGCTGGAGAATAGAACCGAGTCCAGAAATCAACCCACA30.12305168170631665No Hit
GTAAGAAAGGAGTGGGAGAGAGAGATGGTAAGGAAAGAGAACAAAGGTGA30.12305168170631665No Hit
GTTCAAAGGCGCGCAAAGTAGAGCAGTACTGTGTTCCCATTCGGTACCCC30.12305168170631665No Hit
GTATAAAAAAATGCTCATGATCTCAACAGAGGAATGCTCTTTAAAAAAAA30.12305168170631665No Hit
GGGTGAGGGAGAAGCAGGCTTCCCAAAGTGCAGGGAGCCTGATAGGGGGC30.12305168170631665No Hit
AAGTAGAGCAGTACTGTGTTCCCATTCGGTACCCCGAAGAACCCCGAAGA30.12305168170631665No Hit
CTTCAGCTCAGGTCATGACCCCGGGTCCTGGGATCGAGCCCTGCTTTGGG30.12305168170631665No Hit
AGACTGAATGGAAACTGAACGGACAGGTGCTGGTCTTCACACTCCCGCTC30.12305168170631665No Hit
GTATAATTGGGATTAATTGTTCTATGAAGACAACCTGACAAACAACCCAA30.12305168170631665No Hit
GTCTTATATAATATCCAGTGTTCATTACATCATGTGCCCTCCTTAATGTC30.12305168170631665No Hit
ACGGGAAGGAAGGGAGGTTGGTTCAACCACGCCAGGCGGGGAAGGCCAGG30.12305168170631665No Hit
CTACACTTCAAAGATTTCTGCTATTAGAATAAGGTTCTGTTTTGTTAAGG30.12305168170631665No Hit
GTCTTAGCCAAGTCACTTCACCACTTTTTGACTGTTTACTCATTTGCCAA30.12305168170631665No Hit
GAGCAAGGAGCCCGATGTGGGACTTGATCCCAGGATCCTGGGTGGGATCT30.12305168170631665No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)