FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_C6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_C6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1758
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATTAAGATGTATGAGGTGTATTCCTTCCCCATCTTGGGAATTCTAGTT70.39817974971558584No Hit
AATTAAGAGTTATGTTTGTGAATGGGCCAAATTAATTGATAATGGTACAA50.2844141069397042No Hit
CCCCAAATGTTCCCTACTTTAGTGAAGCTTTCTCTAACAAGCCTATCTAA40.22753128555176336No Hit
GGCCTGCACTGAGGAAGAAGGCAGAAGACGGAGAACTGTCAGGAAACAAA40.22753128555176336No Hit
GTACACTATAGATGCCAAGCATGGAATTACTTTACATACATCATCTCCAT30.17064846416382254No Hit
GCTTAGAATTGAGTCTCATTCAGATAAGTTCCCTTTAGTCTGCTTCTACT30.17064846416382254No Hit
GAGCAGTTTCAGTGATATCCCATATGTCTTGGGATATTGTGTTTTCATTT30.17064846416382254No Hit
ACATAATGGCATACAAAAGACTGATCAAGAGATTGAAGCAAGAAGGGGAA30.17064846416382254No Hit
GTTATTATGTCTTAGGTGGAGGAAATGGTCTACGGATTCATGTTTGAAAT30.17064846416382254No Hit
ATTCTATATCATGATCTGGAAGGTGATTACACATGTAAATACTCATCTGC30.17064846416382254No Hit
GGGGAGCGGGAGAGGGAGAAGCAGGCTGCCAGCTGAGCAAGTAGCCCCAT30.17064846416382254No Hit
CTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACC30.17064846416382254No Hit
CCATTACACAAATCATTTGGCTGGGAATGGAACATTTACCATATGTATGA30.17064846416382254No Hit
GTCCTATGTCAGGCTCCCTGCTCAGCAAGGGAGCCCGCTACTCTCTCGCT30.17064846416382254No Hit
GTTCAAAGGCGCGCAAAGTAGAGCAGTACTGTGTTCCCATTCGGTACCCC30.17064846416382254No Hit
GATTTATAGGTTTCTTTTCCCCTTCTTGCTTCAATCTCTTGATCAGTCTT30.17064846416382254No Hit
GTCTTCAGGGACCTGCCATTTAGGAAAACAGGTGAAAGTTGGATTTATTC30.17064846416382254No Hit
GTATTAGACTAATACCTTAGAAATTATGAAAAGTGGGACACTTGGGTGGC30.17064846416382254No Hit
CCTCTCTCCTTGAGGGCCAGGTGGATGATGGCGCCGTTGGCCATGTTGTA30.17064846416382254No Hit
GTCCAGGAAATTAGTAACTCATACATATGGTAAATGTTCCATTCCCAGCC20.11376564277588168No Hit
GTCCCATAGCAATGCTGTGACATAGGTACTAATATTATTCTCACTTTACA20.11376564277588168No Hit
GCTCAGTGGGTTGAGTGTCTGCCTTTGGCTCAGGTCATGATCCCAGGGTC20.11376564277588168No Hit
GGTCAAGGGGATGTGGGGGTAAAAGACAGAAGGTAGAAGGAAAAAAGGAG20.11376564277588168No Hit
ATATATTTATTGTCATGGTTGGGCTTGAGTTCATTTTTTTTCTGGTGAAT20.11376564277588168No Hit
CTTCGGCTCAGGTCATGATCCCAGGGTCCTGGGATCAAGTCCTGCAATCA20.11376564277588168No Hit
CCCTAAGAACATGCAGGAAAAGAGAGTAGCATCTTCAACCTGTCTCTTAT20.11376564277588168No Hit
TTATCAGCCATTAGCTGGTTTCCTGTGTCCCAGCAAATGCTGAGGTAAGT20.11376564277588168No Hit
ATGATCCTCTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATC20.11376564277588168No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACCTGTCTC20.11376564277588168No Hit
GCATTTACATTTTGTGAGGTGAAAACTGTATTAAAAAACAGTACTGAGTC20.11376564277588168No Hit
GAAGAAACCAGCCCTGCCAGCACCTTGAGCTCGCTTGGACTTTCAGCCTC20.11376564277588168No Hit
GTATAAAGTCCCGCCCAAAACTGTACCACAGAAAGAAAGCTGGGTAACTT20.11376564277588168No Hit
GTGCTCACGTGGGTGGGTCTGGTTTTTGTGCCCCACCTCAGCATTCCGTC20.11376564277588168No Hit
TTATATAACAATGCATGGCAAATTTCAAAGGACTGAAATCACGCACAGAG20.11376564277588168No Hit
CTTCCCAAGAGGTCATCCAGGACTGCGGACACCACCGTGAGCCATCCTGG20.11376564277588168No Hit
GTTGTGTATCTTCCCTTCTATTAAGTCTGTTTTCACATTCGCCGCCTTCT20.11376564277588168No Hit
CGTTTCGTCTGAGTTTTGGTTTAATTTTTCTGGGGGCAGAAACCATGGCT20.11376564277588168No Hit
GTTGCTATCCAGGTTGATCCACCTCAGGCCGGTGGCATTCTGGAAGGACT20.11376564277588168No Hit
GACATAAACCATACGATGATTTATAGGTTTCTTTTCCCCTTCTTGCTTCA20.11376564277588168No Hit
CTTACATTCAGCAAGTGAAAGATGCAAATCCTAACCATACACAGGCAGAT20.11376564277588168No Hit
GTCTTATATAATACCCAGTGTTCATTATATCACATGTCTTCCTTGATGTC20.11376564277588168No Hit
GGTCTTAGCCAAGTCACTTCACCACTTTTTGACTGTTTACTCATTTGCCA20.11376564277588168No Hit
GTAAGTATACAGCTTCCTTGCAAAATAACACTGAGCATATCCTGTCTCTT20.11376564277588168No Hit
CTATGAAGTCATATCAGCATGAGGACAGTATTTGTCCTTCTGTGTCTGGT20.11376564277588168No Hit
ACTGAACACTCCCTGAACACTTTAATCTTGGAGGTTTCTTTTCCCTTAGG20.11376564277588168No Hit
GAGGCAGGCAGAGAGAGAGAGGGAAGCAGGCTCCCTACTGAGCAGAGAGC20.11376564277588168No Hit
TGCCAGAACATTGTCTCTATTTTGGAAGATATTAAGTCTCTGTCAGCTGG20.11376564277588168No Hit
GTGCTGATTTGTACCATTATCAATTAATTTGGCCCATTCACAAACATAAC20.11376564277588168No Hit
GCGCAAAGTAGAGCAGTACTGTGTTCCCATTCGGTACCCCGAAGAACCCC20.11376564277588168No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTCTGTCTCTTATACACATC20.11376564277588168No Hit
ACCTCAGGGTTGTGAGATCAAGCCCCGTGATGACCGGCTCCTCCGTGCTG20.11376564277588168No Hit
GGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACCTGT20.11376564277588168No Hit
GTAATATACTGTGCTGCTTCTGAGAAACCAGCAGGGCCTGTTAATTCTTT20.11376564277588168No Hit
GAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAG20.11376564277588168No Hit
ACATACATCATCTCCATTTCACAGATGAGCCTACTAAAGCTAAAAGGGGT20.11376564277588168No Hit
CTGTAGAAATATGCAACCGTTATGATTCACTAAGTTGGAGACATCACCAA20.11376564277588168No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA20.11376564277588168No Hit
ATATAGGCAGCACAAAACGCACAGTAAGGAGTGAGATACCATCCTGTCTC20.11376564277588168No Hit
ATGCATAAGATCAAACAAAATGTTATAAGGAAGAGAGGAACCAGGATTTA20.11376564277588168No Hit
TCCCAGGACCATGGGATCACAACCTGAGCTGAAGGCAAGCACTTTAATGA20.11376564277588168No Hit
ATCGTGTAGCATTTGACATATAGAAAAGCACTTAGGGAAAATCATTGTGT20.11376564277588168No Hit
ATACAAGAAACAAGAGAAAAGTTTTAAAAATCTCATGACTAATTTCCCCA20.11376564277588168No Hit
GAAGACAACCTGACAAACAACCCAATTTTCTCTGTCCTAATTAAGAGTTA20.11376564277588168No Hit
TCCTTATCCCTTTTTTCATAAACATAAAATCTCACACATCCATGGAGATT20.11376564277588168No Hit
GGCAGCGGCAGGCAGAGGGAGAAGCAGGCTCCCCGCTGAGCAGAGAGCCC20.11376564277588168No Hit
GACTGAAACTGGGGATGAGGTAATGCTCTTTGTTGACTTAAGTATTCTAT20.11376564277588168No Hit
TAACACTTTTGTTACAAGCTGTAATCATTTTACTGATTTCTATGTTCATT20.11376564277588168No Hit
TGCCAATATTGCACATTTCAAACATGAATCCGTAGACCATTTCCTCCACC20.11376564277588168No Hit
GTTTTGTGCTGTAGATTAATTTAGGAATTTTTCAGTCATTGTTTCAAATA20.11376564277588168No Hit
GCAGTGTGTCCCTTACGCGGGAACCTTTCCTCTTAGGACACATGTAGAGG20.11376564277588168No Hit
GTGCAAAAATAAGCAATGGCCCTTAAGTAGGAGAACAGATGGATAAATTA20.11376564277588168No Hit
GGGATCATGACCTGAGGTGAAGGCAGACAATCGACCTGTCTCTTATACAC20.11376564277588168No Hit
AGATAAAGCTGTCTAGAGGAAATTGTATAGCCTTAAACACACATTTGAAA20.11376564277588168No Hit
TTGTATGGATAGTTTCTGTCTTCAAGTGCCTTGAGCTTTTCTTTTATGGT20.11376564277588168No Hit
ATATGAATGTACGGGTGCAGTTTTTATTGACTACACTCTATTCCATTTTG20.11376564277588168No Hit
ATCTAGTTCCTATTTTCATGAAGCTTACAGCTTAGTAGGGAAGACGGACC20.11376564277588168No Hit
GAAATGTGTCTATATGGCACCAACTTTCTTCCACCATTTTCTTTAGTTTC20.11376564277588168No Hit
GGGAGAGAGGGAGGCACGCTTCCTGCTAAACAAGGACCCTGATTCGGGGC20.11376564277588168No Hit
TCATGAATCCATTCCTAGATTCTTTATTACAATTCTGCCAACCTTAATCT20.11376564277588168No Hit
GCTTTCGCTCCCCCCTGAGCAGAGAGCCCAACGTGAGGCTCGATCCCAGG20.11376564277588168No Hit
GGATTAGCACACAGTCTAGTTAATAAAGCCCTACTATTCCACCGTGCTAA20.11376564277588168No Hit
GGTCTACGGATTCATGTTTGAAATGTGCAATATTGGCACTGTCTCTTATA20.11376564277588168No Hit
ATCTAAAATATCTCCCCATCCCATTACTCCCTGTCAAAGCCCTTTGTATC20.11376564277588168No Hit
AAACAAGGTTCTATCAAATTACAGTCCCACCAATGACATAATTTATTGAA20.11376564277588168No Hit
GAACAGATCTTCATGATCTCAGAGAACTCTTCTTTCTTGATCCGTCCAGA20.11376564277588168No Hit
TTGGTATACTTTCAATAGACTTAGCTAAAAGATTGTGTAAAACCACAGTG20.11376564277588168No Hit
GTTCCCTAATACTCATGCTGTCTTCAACCAAACTTCCAAAATTTTAACAA20.11376564277588168No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA20.11376564277588168No Hit
GTTTTGTTTTCCCACCCTGGTGGGTCAGTTAGTTTGTAATCGTCTCTAAT20.11376564277588168No Hit
ACCCCGAAGAACCCCGAAGAACCCCGCGGTCACCGATCGTGGTTCAGAGT20.11376564277588168No Hit
GTATAGTGACTCAGCAGTTACTCAGAGCTTCTCACAGAAAGTGTACTCCC20.11376564277588168No Hit
GAACTTATTGAACCGACCTCATGTGTTTTCTTTTGAAAAATGGGAATCTT20.11376564277588168No Hit
TTAGTAGGCTCATCTGTGAAATGGAGATGATGTATGTAAAGTAATTCCAT20.11376564277588168No Hit
CTACTGATGGAGTGTTATTATGTCTTAGGTGGAGGAAATGGTCTACGGAT20.11376564277588168No Hit
GAAGATTGTGCATGTAGCCCATGAGTTGTTACCAGAAATTCTCAAGGTTG20.11376564277588168No Hit
AATCAGGATTAGGTAGGAAGAGACTTGGAACATAGAAACTTAAAGAAAAT20.11376564277588168No Hit
GTCTATATGGCACCAACTTTCTTCCACCATTTTCTTTAGTTTCAGTGCCT20.11376564277588168No Hit
TCATTAAACTTCATGTTGTTGCTATTTCACTAATAAAAAAACCTTCTAAC20.11376564277588168No Hit
CTTTTGGAGAACTGGGAGCAAGGCAAAGAAGACAGCGGGTCCTCACTCCT20.11376564277588168No Hit
ACTCACCTGCATGCTTTGTCCCACCCTCCCTCAACACCTGGCCACACGTC20.11376564277588168No Hit
CCCATTTCCTTTGCTTGAACTCTCTGGCCTTTTCTCATATGCATTTGACA20.11376564277588168No Hit
AGTCCAACCAGCTGAGCCACCCAGGTGCTCTGGGGGAGATCCTGTCTCTT20.11376564277588168No Hit
CACATGAGGTCGGTTCAATAAGTTCCTTAAGGTCATGGTTTTAGTTTTCC20.11376564277588168No Hit
GAGCAAAAGCAGGGAGACCTTCCTTCCTTCCCCCAGGCTTGGGATCTTGG20.11376564277588168No Hit
GCTGGGTACAGGCCGACAAGAGATGCTTTGACAGGTCTCTCCCACGGCCC20.11376564277588168No Hit
GACTTGATCCCAGGGATCATGACCTGAGTTGAAGGCAGTGGCTTAACCTG20.11376564277588168No Hit
GCCCAGCCAGGAGCACCCTCCGGCCTCCTTCCTCATCCGCAGTCTTCTCT20.11376564277588168No Hit
AACAAGGATTCCTTCAACTCAGTAATTGAGTTATCTTTTATTGCTTATTT20.11376564277588168No Hit
GGGAGAGAGAGATGGTAAGGAAAGAGAACAAAGGTGAAAAAATCTTTCTT20.11376564277588168No Hit
CCTCCTTGAGGGGTGCAACCCTTCGGCCAAGCCAGAAGCCTGGACAGCAT20.11376564277588168No Hit
CTACTGTATCTTACTTTTTCCTCAGGCCACATCATGGACTGTCTCTTATA20.11376564277588168No Hit
GGTAATCGTCAAGGTTTCCCTTTAGCCTAGGGGTTAAAGGTATGAGCATA20.11376564277588168No Hit
GAGCAAAAGCAGGTGTGAAGAAACTTTTGAGGTGATGCAAATGTCTGTTA20.11376564277588168No Hit
ACTAAAAATAGGCCAGATAGGGGCACCCGGGTGGCTCAGGTGGTTAAGCA20.11376564277588168No Hit
CATAATAACACTCCATCAGTAGTTCTTTTGTCAAATGCATATGAGAAAAG20.11376564277588168No Hit
TGCTTGAACTCTCTGGCCTTTTCTCATATGCATTTGACAAAAGAACTACT20.11376564277588168No Hit
GGATTTGCATCTTTCACTTGCTGAATGTAAGAAGCACCAATAGAGGATCA20.11376564277588168No Hit
GCTTAGGACCCTATGGCTCATGTCTCCTAACATCCCTCTTCTAGGAACAG20.11376564277588168No Hit
GCCAATGAACATAGAAATCAGTAAAATGATTACAGCTTGTAACAAAAGTG20.11376564277588168No Hit
GGCCCTAAGAACATGCAGGAAAAGAGAGTGGCATCTTCAACAAATGAATA20.11376564277588168No Hit
GTTTAAATGTTCATCTAAAATTGCCTTTCTTCAGACTCTACTAACCTGTT20.11376564277588168No Hit
GACCCAGTGAAGGTTTTTAAGCAGTGGAAATGGCACAATTTGCTTTGTTT20.11376564277588168No Hit
GTCTAGTTAATAAAGCCCTACTATTCCACCGTGCTAACAGTCCCTTTGAG20.11376564277588168No Hit
GGACAGGGTTGGTTATTGACTGAAACTGGGGATGAGGTAATGCTCTTTGT20.11376564277588168No Hit
ACAAAAGACTGATCAAGAGATTGAAGCAAGAAGGGGAAAAGAAACCTATA20.11376564277588168No Hit
CATAACTCTTAATTAGGACAGAGAAAATTGGGTTGTTTGTCAGGTTGTCT20.11376564277588168No Hit
CCTAAAGGAGATAAAAGAGGGCCATGCTGTGACACCTGGGTGGCTTACTC20.11376564277588168No Hit
GTATAATTGGGATTAATTGTTCTATGAAGACAACCTGACAAACAACCCAA20.11376564277588168No Hit
AACCAGGGCAACTAGGTGGCTCAGTCGATTGTCTGCCTTCACCTCAGGTC20.11376564277588168No Hit
TTGCTAGCGTATCTGTGCCTTTGTTCAGATTACAAAAGGACACTTCTTTT20.11376564277588168No Hit
ACTAAACACCACCAAGGTGGTGATCAATCTGTCAGCCTGTTGTCTTCAGG20.11376564277588168No Hit
GTGTAGCATTTGACATATAGAAAAGCACTTAGGGAAAATCATTGTGTGAC20.11376564277588168No Hit
ACTTTTGACATAAACCATACGATGATTTATAGGTTTCTTTTCCCCTTCTT20.11376564277588168No Hit
TGGCTATACAGCCCAAGAATATGGCGCTGGCACTTACGGGGCTAGTAGCA20.11376564277588168No Hit
GTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGACAG20.11376564277588168No Hit
ATTAAAAACATTTCTAAAAGGAAAAGCATAAGCCAATGTTGTAGACATTT20.11376564277588168No Hit
AATTAGGACAGAGAAAATTGGGTTGTTTGTCAGGTTGTCTTCATAGAACA20.11376564277588168No Hit
TGGCACAGGAGGTCCTTTAAACCTAATCCTCGCTGGGCAGTCGCCTTCAC20.11376564277588168No Hit
AGCGAAAGCAGGATCGATGAGCTTCTCACAAAGTGATACTCAATTATAAA20.11376564277588168No Hit
GCAAAAGCAGGGGATTAGGAGTACACTTTCTGTGAGAAGCTCTGAGTAAC20.11376564277588168No Hit
CCCCCTCCCAGGCCTATCATCTCAAAAGGGGTACAGCTTGCCAACACTCA20.11376564277588168No Hit
TTTCTCTTTTGTAGAAAGGGATGACTGTAGCATCTCATCTCGGGATTTGG20.11376564277588168No Hit
AAGATATGCATCTTGGAGACACTCATGAGCAAACCGCACATCAGAGGCTG20.11376564277588168No Hit
TTTGTATCCTTCTTAACACTTTTGTTACAAGCTGTAATCATTTTACTGAT20.11376564277588168No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)