FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_B8_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_B8_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCTAAATATCGTCTTTAAATCGGAGAAAGAATTCCTAGCCAAGTTATT12.1739130434782608No Hit
GCTAAATACCCTCCTTATCAAGAGATTCTTTCTTCCCAAATGTAGGGTAC12.1739130434782608No Hit
GGTCAATTATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATG12.1739130434782608No Hit
CTTCTGAACTCAGTTTGGTGTGTGTCTTTTCTTCACGCTCCTGTTGAAGC12.1739130434782608No Hit
AAGCGAGGGAGGCCATGAGGGCAGAAAACGAGCACTGTCTTCCTTGCACT12.1739130434782608No Hit
TGCGGGAGCCTTGGTTGACGATGCGCGTCTCTTGTCCGGCATGGTCGAGG12.1739130434782608No Hit
CATATAGACACATTTCTTGAGATATGAGAAGGCAAAAAAAAAAATCAGAC12.1739130434782608No Hit
AAGCAGGACCGTGAGGGTGGTGCGCAGCTGGCTGGGCCCGCAGCGGAGGC12.1739130434782608No Hit
ACGCATTATAGTTAAAAATACAAGACTCTAATTACAGAAAGGAAGCAATA12.1739130434782608No Hit
ACTGAGTCACCCAGCTGCCCCAGTTTTTTTAAATTTTATTTCAATTAATT12.1739130434782608No Hit
AAAAAATAGAACCTATAACCTCTCGAATTCACAAGGCGAACAAGGAAAAG12.1739130434782608No Hit
GGTCCTCATCCCAGGGTCCTGGGATCAAGTCCTGCAATCAAGTCCTGCGT12.1739130434782608No Hit
CTTTTAGAGACAGATAATTAGAGCATTGGTGTCTAGCCCTTTTTTTCAAA12.1739130434782608No Hit
AAGCTATATTCATTACCAAATCCAAGTGTGCTGGTGTCTTTGAGACTGGA12.1739130434782608No Hit
GCCTAGAGGGGTGGCAAACTCCTGTCCTGAGAAATATGGAGACAAAGGCC12.1739130434782608No Hit
CTCACAAAGTGATACTCAATTATAAACATTCTCCTTATCTTTACATAGGG12.1739130434782608No Hit
TGTCCGAAAGGTAGCGCGAAGTAGGTACAGATGCAATTGTCATTCTACTG12.1739130434782608No Hit
TATTTCAGGTGGATAACTTGAAGTGGTTTGATCGAGCCAGCTCTCTCTAT12.1739130434782608No Hit
ATCTTGGGGGGCTATATGAAGCAATCGAGGAGTGCCTGATTAATGATCCC12.1739130434782608No Hit
GTAAGTATGCTAGAGTCCCGTTTTCGTTTCAATACCAACACTACGTCCCC12.1739130434782608No Hit
CAAAACTACATCTCCCTTTTCTCATCTTCCTTCCTGCACCTGTCTCTTAT12.1739130434782608No Hit
CATGAAGTGTACTTTTTGATTATGGACATATGGTCCACAGTGGTCTTAGT12.1739130434782608No Hit
GATGTATGTAAAGTAATTCCATGCTTGGCATCTATAGTGTACTCAATAAA12.1739130434782608No Hit
ATTAGATATACTTTCTGTTCCTCCTCCTGCTTTCGCCTGTCTCTTATACA12.1739130434782608No Hit
CCCTGCACTCTGCCACCCCCACCTCAGACAAAGGCAACTCCTCCAACAAC12.1739130434782608No Hit
TTCCAGCGCAAAATGCCATAAGCACCACATTCCCTTATACTGGAGATCCT12.1739130434782608No Hit
ATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCC12.1739130434782608No Hit
GAGTGAGCTAATGGAAGGGGAAGTGCGGTACAGACACAGGCTGTTGTTAT12.1739130434782608No Hit
CCAAGTAACCTGTCCAACCAGACGCCAGTCTGTGACGGGACCACAACACA12.1739130434782608No Hit
GCCTTTAGTTATCGCCTCTAGAAATAGTGTGTAGTTTTATACAGAGTCTG12.1739130434782608No Hit
GCATAAATGTTATTTGTTCGAAACTATTCTCTGTCGCTTTCAATCTGTGC12.1739130434782608No Hit
GTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGA12.1739130434782608No Hit
GGTTAAAGCCTCTGCCTTCAGCTTGGGTCATGATCTCAGGGTCCTGGGAT12.1739130434782608No Hit
GTAGAAACAAGGGGAAGAAGAGACTGTTCCGGGAATAGAACTGTCTCTTA12.1739130434782608No Hit
CCTTGATACTACTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAA12.1739130434782608No Hit
TCCTTGATGTCCATCGTCCAGTTACCCCATTCCCTCACCCCTCTCCCTTC12.1739130434782608No Hit
ACCCAATCCATTGTCTGCAAATCGCATTCGGATATGCCAAAGGAAAACTG12.1739130434782608No Hit
GTTTATACCCAAGGCCTTGGGAAAAAAGTATGGAAAATTCATGCAAACAG12.1739130434782608No Hit
ATATTCTTGGATGGGGGAACTATAAGAGCAAGTTATATTCAGTATGGGGA12.1739130434782608No Hit
CTGTTGGCTTTTTTTATTTTTTTTAAACCCATTTCCTTTGATTGAAAAAT12.1739130434782608No Hit
AAATTCCAGCGCAAAATGCCATAAGCACCACATTCCCCCAAAGGGGAATT12.1739130434782608No Hit
GAATCTGGGATCACGACCTGAGCCAATGGCAAATGCTTAATGATCCTCTA12.1739130434782608No Hit
GTGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGTGGGGAGGTGGGGGG12.1739130434782608No Hit
GCCTGATATGTTCTCTTTTCTGGTTTTCCTATTCAGTCTCCAGAACCCAT12.1739130434782608No Hit
ACACTGAAGAGAAGCTATTGAGTCCATACAGCCATGTTGGGAGATAGGAT12.1739130434782608No Hit
AAGCTAAAACCAGATATAACAGGTCAGTAGAAAAAAAAAAGAGTATCAGT12.1739130434782608No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)