FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_B6_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_B6_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1532
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGT40.26109660574412535No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG40.26109660574412535No Hit
AAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAA40.26109660574412535No Hit
GTATAGTGACTCAGCAGTTACTCAGAGCTTCTCACAGAAAGTGTACTCCT40.26109660574412535No Hit
CTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAG40.26109660574412535No Hit
CCATAAAAGAAAAGCTCAAGGCACTTGAAGACAGAAACTATCCATACAAA40.26109660574412535No Hit
GTTAAAGTCAGGGATTTGGGGGCACCTGGGTGGCTCAGTTGTTAAGTGTC40.26109660574412535No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA40.26109660574412535No Hit
CATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAAT40.26109660574412535No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT40.26109660574412535No Hit
ATTTTCTTCTGTCTTTCCTTCCTTCTGGATTCCAGTTATACCAAATGATA30.19582245430809397No Hit
GTGTTACCATTCCATTCAAGTCCTCCGATGAGGACCCCAACTGCATTTTT30.19582245430809397No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCC30.19582245430809397No Hit
ACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTA30.19582245430809397No Hit
CTCATGAGCAAACCGCACATCAGAGGAATTAAAAGATGACCTGATGGAGA30.19582245430809397No Hit
GTAATTGGGTATCTCATTGCCATCATCCACTTCATTCCTGTCTCTTATAC30.19582245430809397No Hit
GGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGA30.19582245430809397No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC30.19582245430809397No Hit
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTA30.19582245430809397No Hit
GAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAA30.19582245430809397No Hit
GAAGGAAAGAGAGCAAACAGGGGGAGCAACAGGCAGAGGGAGAGGGAGAA30.19582245430809397No Hit
GAGCAAAAGCAGGGGATTAGGAGTACACTTTCTGTGAGAAGCTCTGAGTA30.19582245430809397No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT30.19582245430809397No Hit
CAAGGTATTGGTATGAAAGAACTATGCTAGGATAAGAAATGAGGCTGTCT20.13054830287206268No Hit
CTCTCCCACTCCTTTCTTACTAAACCCTTTCTTCCTTTCCTGTCCTTTTT20.13054830287206268No Hit
TCCCAAAGTGCAGGGAGCCTGATAGGGGGCTTGACCCTGGAATCATGAGG20.13054830287206268No Hit
ATATGGCACCAACTTTCTTCCACCATTTTCTTTAGTTTCAGTGCCTCTAT20.13054830287206268No Hit
GTTGATGATGCAAAAAAACAAGATTAGCAAACCAGTCCCTGTCTCTTATA20.13054830287206268No Hit
GTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGA20.13054830287206268No Hit
TCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGACCATAT20.13054830287206268No Hit
GGGTTAGACCTCTGCCTTCGGCTCAGGTCATGATCTCAGGGTCCTGGGAT20.13054830287206268No Hit
TACTCATGCTGTCTTCAACCAAACTTCCAAAATTTTAACAAAGGGTTTCA20.13054830287206268No Hit
AGCTAGTGTTATTCATACTCTGACACAACAGTTCCCCCTGTCTCTTATAC20.13054830287206268No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAACTGTCTC20.13054830287206268No Hit
TGTATGAGGTGTATTCCTTCCCCATCTTGGGAATTCTAGTTAGTCGAAGA20.13054830287206268No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA20.13054830287206268No Hit
GACAGAAACTATCCATACAAAGAACAGATAGGAAAAAAGCTTAAAAAAAA20.13054830287206268No Hit
GACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGC20.13054830287206268No Hit
CTTGTATTCTGGACTGAGATTAGTCTAGAGCTGAGAACAGGCTGTCTCTT20.13054830287206268No Hit
GGTCCTGGGATTGAGTCCTGTGTCTGGCTCCCCAGTCAGTGGGGATCTTG20.13054830287206268No Hit
GTTTGTTTCCTGACAGTTCTCCGTCTTCTGCCTTCTTCCTCAGTGCAGGC20.13054830287206268No Hit
GTATACCCATGTTCATAGCAGCATTCCTCCAAATAGCTAAAAGGTTAATC20.13054830287206268No Hit
GAATAAAAGAATTCGGATGGCCATCAATTAGTTGTCGAATAGTTTAAAAA20.13054830287206268No Hit
AGTAGAAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCAT20.13054830287206268No Hit
ACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATT20.13054830287206268No Hit
ATTATCTAACGTCAGTTTGTTTCCTGACAGTTCTCCGTCTTCTGCCCTGT20.13054830287206268No Hit
GGAGTACACTTTCTGTGAGAAGCTCTGAGTAACTGCTGAGTCACTATACC20.13054830287206268No Hit
GATATGCATCTTGGAGACACTCATGAGCAAACCGCACATCAGAGGAATTA20.13054830287206268No Hit
AAACGAAAACGGGACTCTAGCATACTTACTGACAGCCAGACAGCGACCAA20.13054830287206268No Hit
GTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTA20.13054830287206268No Hit
AAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCAC20.13054830287206268No Hit
GACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGA20.13054830287206268No Hit
ATAGTGACTCAGCAGTTACTCAGAGCTTCTCACAGAAAGTGTACTCCTAA20.13054830287206268No Hit
CTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGA20.13054830287206268No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGC20.13054830287206268No Hit
GTCAGAGAAGGAACACAAGCAGGGGGAGTGGGGAGAGGGAGAAGCAGGCT20.13054830287206268No Hit
GAATTCGGATGGCCATCAATTAGTTGTCGAATAGTTTAAAAACGACCTTG20.13054830287206268No Hit
TTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGC20.13054830287206268No Hit
GTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGACAGCCA20.13054830287206268No Hit
ATTCTACACTGTAGAGACCCATTAGAGCACATCCAGAAACCTGTCTCTTA20.13054830287206268No Hit
GCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTGG20.13054830287206268No Hit
ATGTCCAAGTCAGTAGTTCAAAGCTTACAGTGAGCGGCATTCCATAGTGT20.13054830287206268No Hit
GCCTTCACCTCAGGTCATGATCCCAGGGTCCTGGGATTGAGTCCTGTGTC20.13054830287206268No Hit
CCTCTGCAAACTCATGAAAGAAATCTTGGATAAGAAGGTTGAGAAGGTGA20.13054830287206268No Hit
CTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCG20.13054830287206268No Hit
CTTGTATACCCATGTTCATAGCAGCATTCCTCCAAATAGCTAAAAGGCTG20.13054830287206268No Hit
GCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAAC20.13054830287206268No Hit
CTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCA20.13054830287206268No Hit
TTTTTAAACTATTCGACAACTAATTGATGGCCATCCGCTGTCTCTTATAC20.13054830287206268No Hit
CAGCATGAGTATTAGGGAACAGAACGAGTTACCAGGAAGCTCCCATACGG20.13054830287206268No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA20.13054830287206268No Hit
ACTCTCAGCCCTGACTCATGTACTCCGAAGCATTCCCTACCCTGCAACCA20.13054830287206268No Hit
CCTGGGTGGCTCAGTGGGTTAAAGCCTCTGCCTTCGGCTCAGGTCATGGT20.13054830287206268No Hit
GTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATTAGAGACCTTGAT20.13054830287206268No Hit
CATTCATGGAGACTTACCTATCTGAAGTCATTGAGAAAAATGCCTGATGT20.13054830287206268No Hit
GGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATCTGTCT20.13054830287206268No Hit
CCATTGTATGTATACACCATGTTTTGTTTATCCATTCATCATCAGAGCAC20.13054830287206268No Hit
GTATTTATCGTCGCTTTAAATACGGTTTGAAAAGAGGGCCTTCTACGGAA20.13054830287206268No Hit
AGGAGAGAACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAA20.13054830287206268No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)