FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_B6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_B6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1307
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATG60.45906656465187456No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC30.22953328232593728No Hit
GGACTCTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGA20.1530221882172915No Hit
GAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGA20.1530221882172915No Hit
AAGAAGCACCTGGAGATCAATCCTGACCACCCCATTGTGGAGACGCTGCG20.1530221882172915No Hit
TTCCTAGTTTAAACATAAAGTCACTATGGATTAAGCAAGTGGGAAAAGAA20.1530221882172915No Hit
ATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACAC20.1530221882172915No Hit
TTGCAAGATTGCTCAGTTCATTGATGCTTAATGCCTGTCTCTTATACACA20.1530221882172915No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG20.1530221882172915No Hit
GTCCTTAAGCATCTGCCTTCAGCTCAGGTCATGATCCCAGGGTCCTGGGA20.1530221882172915No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG20.1530221882172915No Hit
GTGCTCTGATGATGAATGGATAAACAAAACATGGTGTATACATACAATGG20.1530221882172915No Hit
CCTTGCTCAGTGGGGACCCTGCTTCTCCTCCTGCCTGCCTGTCTCTTATA20.1530221882172915No Hit
GACTTACAGTTCTTGGAAAGGATGCAGGTGCATTGACCTGTCTCTTATAC20.1530221882172915No Hit
GTTCATTGATGCTTAATGCTGGGCCATATCTCCTGTCTCTTATACACATC20.1530221882172915No Hit
GCATTAAGATGTATGAGGTGTATTCCTTCCCCATCTTGGGAATTCTAGTT20.1530221882172915No Hit
GTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTA20.1530221882172915No Hit
CATCAATAGACATTTACTGAGCATCGAAAACCTACCAAGTATTTGTGCCT20.1530221882172915No Hit
GCTCAGTGGTGAGGCGTCTGCCTTCTGCTCGGGGTCATGATCCCACAGCT20.1530221882172915No Hit
GCCATCAATTAGTTGTCGAATAGTTTAAAAACGACCTTGTTTCTACCTGT20.1530221882172915No Hit
TTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCT20.1530221882172915No Hit
CTTAACAACTGAGCCACCCAGGTGCCCCCAAATCCCTGACTTTAACTGCA20.1530221882172915No Hit
ACTAATGGGGAAGCAAAGCACATAATTTGTCTAAGATCCCACAGACAGTG20.1530221882172915No Hit
GATTATGGCCATATGGTCCACAGTGGTCTTAGTGCTGTCTCTTATACACA20.1530221882172915No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA20.1530221882172915No Hit
ACCTTACATGCTTAGAATATTCTGGAGCTGCAATCACCTGTCTCTTATAC20.1530221882172915No Hit
GAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAA20.1530221882172915No Hit
AGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGG20.1530221882172915No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)