FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_B5_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_B5_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1386
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC40.2886002886002886No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT40.2886002886002886No Hit
GTAGAAACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCTGTC30.21645021645021645No Hit
ATGCTCCTCAGATGAACCTGAAGGTCAGACAGAACAGTGGGGATGTAGAG30.21645021645021645No Hit
CCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCAC30.21645021645021645No Hit
CTTCAGCTCAGGTCATGATCTCAGGGTCCTGGGATCTGTCTCTTATACAC20.1443001443001443No Hit
GCTGAAGGCAGACACTTAACAACTGAGCCACCCAGGTGCCCCCAAATCCC20.1443001443001443No Hit
CTTTTAGCTTTAGTAGGCTCATCTGTGAAATGGAGATGATGTATGTAAAG20.1443001443001443No Hit
GACCAAACCCAGGTTTGGAGGTAGTACAAAATCGCAGAGAGGACAGCAGC20.1443001443001443No Hit
GGTTACTCCTGTGGTCTTAACATACAAATGGGAAAACCAAGATCCCTGTC20.1443001443001443No Hit
GGAAATTCCAGTCTGTGGTTAGGTATAATTGGGATTAATTGCTGTCTCTT20.1443001443001443No Hit
GATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGT20.1443001443001443No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG20.1443001443001443No Hit
AAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAA20.1443001443001443No Hit
AGGCTATACACTGTGTGATTCCAAGTATATGACATTCTGGGCAAGGCATA20.1443001443001443No Hit
AAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTATTCTCTCC20.1443001443001443No Hit
ATGTCCAAGTCAGTAGTTCAAAGCTTACAGTGAGCGGCATTCCATAGCTG20.1443001443001443No Hit
CATATTCTACACTGTAGAGACCCATTAGAGCACATCTGTCTCTTATACAC20.1443001443001443No Hit
CCTCTGAGTATTTTGGGTAGTCATAAGTCCCATTTTTGACACTTTCCATG20.1443001443001443No Hit
GATTATTCATTTGTTGAAGATGCCACTCTCTTTTCCTGCATGTTCTTAGG20.1443001443001443No Hit
ACCCCAGAGAGAGGATCTTCTCACTCTCTTCTTTAGCTGTCTCTTATACA20.1443001443001443No Hit
GATAGTTTCTGTCTTCAAGTGCCTTGAGCTTTTCTTTTATGGTCTCTGTT20.1443001443001443No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCC20.1443001443001443No Hit
GTTGTTAAGTGTCTGCCTTCAGCTCAGGTCATGATTCCAAAGTCCTGGGA20.1443001443001443No Hit
ACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCA20.1443001443001443No Hit
CTTTACATACATCATCTCCATTTCACAGATGAGCCTACTAAAGCTAAAAG20.1443001443001443No Hit
TTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTAT20.1443001443001443No Hit
ATCTTGGAGACACTCATGAGCAAACCGCACATCAGAGGAATTAAAAGATG20.1443001443001443No Hit
CGGGCACCCCGCTCTCCCTGCTGATCCATCACTCACTCGTCCAGCTCATC20.1443001443001443No Hit
CCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTAGT20.1443001443001443No Hit
TGCCGGGGCAGGGCCGAGGGCACCTCTTCGAGCTGGTTCTTCTCCATGTA20.1443001443001443No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGC20.1443001443001443No Hit
AGTCAGTAGTTCAAAGCTTACAGTGAGCGGCATTCCATAGTGTGCATGCT20.1443001443001443No Hit
CTTTTAGACTAGGAAGGAAGGGAAGTACAGTGGTTATGTACTGTCTCTTA20.1443001443001443No Hit
GAATAGAACCGAGTCCAGAAATCAACCCACACAAGGACCTGTCTCTTATA20.1443001443001443No Hit
CTTAACAACTGAGCCACCCAGGTGCCCCCAAATCCCTGACTTTAACTGCA20.1443001443001443No Hit
GCCATGGAACAGGAACAGGATACACCATGGACACCAGAAGTGCTGCAACT20.1443001443001443No Hit
GATCTGAAGAAATACCCTTTTACTCTCCAACACCAAGTGCAAGGAAGACC20.1443001443001443No Hit
GAGATTAAGAGACCAGAAGCCCATTTATGGATCCTGCTCTAAGTCTGTCT20.1443001443001443No Hit
GGAAAAGAGAGGCTCCTGGGTGGTTCAGTCAGTTAAGCATCCAACCCCCT20.1443001443001443No Hit
GTCGATTGTCTGCCTTCACCTCAGGTCATGATCCTGTCTCTTATACACAT20.1443001443001443No Hit
CAGCATGAGTATTAGGGAACAGAACGAGTTACCAGGAAGCTCCCATACGG20.1443001443001443No Hit
GTATAAGGGAATGTGGTGCTTATGGCATTTTGCGCTGGAATTTTTAGGAA20.1443001443001443No Hit
GGTGATCATCACGCCCAAGTCAAAAAGTCAGTGTACTTCCCAAATTAGAG20.1443001443001443No Hit
CAGTTGCAATGGGCAGGGTGGCAGGGCAGCTACTGTCTCTTATACACATC20.1443001443001443No Hit
GAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCA20.1443001443001443No Hit
CTATTCTTTTTTCCAGGTGGTTGAACTCTTTACCTACCTGTCTCTTATAC20.1443001443001443No Hit
CAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCA20.1443001443001443No Hit
CTAGACACCATGGCCTCCACCATGCTAGAAATTCCAACCGGTCTCCTATA20.1443001443001443No Hit
GCATGAAAACGTAACCACTTACCAGTAATAAACCTGTCTCTTATACACAT20.1443001443001443No Hit
AGGCCCAGGTGACTCAGTTGGTTAAGCATCTGCCTTCGCCTCAGGTCACA20.1443001443001443No Hit
GTTCTAAACAGTTCTAAAACGTGGCTACTGCTTGCATGAAAAACTGTCTC20.1443001443001443No Hit
GTTTTCTTCTTTCTCTTTACCATCTGAAGCCTCAAACTGAGAGTCGTTAA20.1443001443001443No Hit
GGGCCTTAACAGAGACCATAAAAGAAAAGCTCAAGGCACTTGAAGACAGA20.1443001443001443No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)