FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_B3_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_B3_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1235
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAA30.24291497975708504No Hit
GTATGCTAGAGTCCCGTTTTCGTCTCATTGCCAACACTACGTCCCCTTGC30.24291497975708504No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGC30.24291497975708504No Hit
GACTTTGGAATCATGACCTGAGCTGAAGGCAGACGCTTAACCTGTCTCTT30.24291497975708504No Hit
CTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACCAT30.24291497975708504No Hit
CCCCAACCCTGTGCACTCAGCAGCCAAAACGCAAAATCCTGTCTCTTATA30.24291497975708504No Hit
GCCCTACTATTCCACCGTGCTAACAGTCCCTTTGAGAACTCAGCCTGTCT30.24291497975708504No Hit
CTTCCAAATGTGTGCATATTGCAGCAAACTTGTTAGTTTCGATTTTCGGA20.16194331983805668No Hit
AGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTG20.16194331983805668No Hit
GGTCCCAGGGTCCTGGGATTGAGCCCTGCATCGGGCTCTCTGCTCAGCAG20.16194331983805668No Hit
GCTTAGGGCTGGAGGGGGGATAGGGAGTCATAACAAGGACACGGGATTGC20.16194331983805668No Hit
GCTAATCACCTCCCACCAGGTCATTCCCCCTACATCTGTCTCTTATACAC20.16194331983805668No Hit
GGTCATGATCCCAGGGTCCTGGGATCCCAGAGCCCCACGTCGGGCTCTTC20.16194331983805668No Hit
CCGCCAAGCAGAGAGCCCAACGCGGGACTTGATCCCAGGACCCCGAGACC20.16194331983805668No Hit
GTATGCTAGAGTCCAGTTTTCGTTTCATTACCAACACTACGTCCCCATGC20.16194331983805668No Hit
GGTCTGCCCCTGCAATTTTGGTAGAGGGACTATAGTAAGTTAGCTCAGAA20.16194331983805668No Hit
GTAAATGTTCCATTCCCAGCCAAATGATTTGTGTAATGGATGGCTGAGTT20.16194331983805668No Hit
CTGGACGGATCAAGAAAGAAGAGTTCTCTGAGATCATGCTGTCTCTTATA20.16194331983805668No Hit
GTAGGTAAATCTACAGTCTATCTTGGGCTAGAGATAGAATCATGAAAGTG20.16194331983805668No Hit
AGCCAGGGATCAGAAGGTCAGGATAGGATAGTCCACTGGAATTTCATTTT20.16194331983805668No Hit
GCCTGGATGTGGTTGGGAGGGACTAGTGGTGCAGCAGCCACATGGCAATG20.16194331983805668No Hit
GTATCTCACTCCTTACTGTGCGTTTTGTGCTGCCTATATTGTACACCTGT20.16194331983805668No Hit
TCATCCACTTCATTCTGAGTGCGGGGTTCTTCTCTTGTCTTCCTGATGTG20.16194331983805668No Hit
TAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGCT20.16194331983805668No Hit
CCATGCAATCTATTCGAGAAATTTTTCCCTAGCAGTTCATATAGGCTGTC20.16194331983805668No Hit
GGATCAGACCGAGTGATGGTATCACCTCTGGCCGTAACATGGTGGAATAG20.16194331983805668No Hit
GTTCATTGATGCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAA20.16194331983805668No Hit
CTATTATGTGTCCTAGAAACCTATGAACCATGTTTAAGCATTTCACCCTC20.16194331983805668No Hit
TTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCT20.16194331983805668No Hit
GTCTAGGGCCCGGATTGATGCCAGGGTCGACTTCGAGTCTGGACGGATCA20.16194331983805668No Hit
TTACACATGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTT20.16194331983805668No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA20.16194331983805668No Hit
ATCCCAGGGTGCTGGGATGGAGCCCCGCATCAGGCTCCTTGTCAGCAGGA20.16194331983805668No Hit
TCTCACTTCTGTGTCTTTCTCTGGCAAAACTCCAGTCCTGGTGATTGGCA20.16194331983805668No Hit
TTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCT20.16194331983805668No Hit
ACCCACACAAGGACCGCCAGCGGATTTTCCACACGGGCCCTAAGAACTGT20.16194331983805668No Hit
ATCCCGTTCCTGTTCCATGGCTGTATGGAGGATCTCCAGTATAAGGGCTG20.16194331983805668No Hit
AGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGG20.16194331983805668No Hit
GGAAGATGCCCCCCAAGGTGCCCACGGCCATTCACCAGCTCTACCTGGAC20.16194331983805668No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)