FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_A9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_A9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1087
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGTAAGGCTTGCATAAATGTTATTTGTTCGAAACTATTCTCTGTCGCT50.45998160073597055No Hit
GTATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAGTGCATGTGTG50.45998160073597055No Hit
GTAGTTGTAAGGCTTGCATAAATGTTATTTGTTCGAAACTATTCTCTGTC50.45998160073597055No Hit
GTAATCCACAATATCAGGTGCAAGATCCCAATGATATTTGCTGCAATGAC40.36798528058877644No Hit
TGATACTACTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAAATT40.36798528058877644No Hit
ACTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAAATTTCACCAT40.36798528058877644No Hit
CTACTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAAATTTCACC30.27598896044158233No Hit
GTAGAAACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATCC30.27598896044158233No Hit
CTTATGAGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGAA30.27598896044158233No Hit
CTCCAAGCGAATCTCTGTATATTTTCAGAGACTCGAACCGTGTTACCATT30.27598896044158233No Hit
GTATTTTGGGTAGTCATAAGTCCCATTTTTGACACTTTCCATGCACGTGT30.27598896044158233No Hit
GTGAGCGTGAACACAAATCCTAAAATTCCCTTAGTCAGAGGTGACAAGAT20.18399264029438822No Hit
ACTGGAAAGTGTCTTTGCAGGAAAGAACACAGATCTTGAGGCTCTCATGG20.18399264029438822No Hit
AACTACTTCAGTGCATGTGTGAGGAAGGAGTTGAACCAAGATGCATTAAG20.18399264029438822No Hit
GTACTATGTTCTTTTCCATGATCGCCTGGTCCAATCGCACGCAAAGAGGG20.18399264029438822No Hit
GAAACAAGGGTGTTTTTTATCATTAAATAAGCTGAAACGAGAAAGCTCTT20.18399264029438822No Hit
TTTTTAAACAATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCG20.18399264029438822No Hit
GTAACACGGTTCGAGTCTCTGAAAATATACAGAGATTCGCTTGGAGAAAC20.18399264029438822No Hit
CCATTTGAATGGATGTCAATCCGACTCTACTTTTCCTAAAAATTCCAGCG20.18399264029438822No Hit
GAAAAGAACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATT20.18399264029438822No Hit
GAGGAATCCAGCGAGACACTTAGAATGACAATTGCATCTGTACCTACTTC20.18399264029438822No Hit
GGAGGTAGTGAAGGTCTCCCATTCTCATCACAGTTTCTCCAAGCGAATCT20.18399264029438822No Hit
GTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGA20.18399264029438822No Hit
CCTCAGTGAAAGCCCTTAGTAGTATCAAGGTCTCTAATCGGTTAAAGATT20.18399264029438822No Hit
CCCATTCTCATCACAGTTTCTCCAAGCGAATCTCTGTATATTTTCAGAGA20.18399264029438822No Hit
GTTGGTTCTATTGGAAAATGAAAGAACTTTGGACTACCACGATTCAAATG20.18399264029438822No Hit
GTTCTACTTCAAGCAGTAGTTGTAAGGCTTGCATAAATGTTATTTGTTCG20.18399264029438822No Hit
TCATTGTTCAGGCACTTAGGGACAACCTGGAACCTGGAACCTTCGATCTT20.18399264029438822No Hit
CTTTTCATTTCTGCTCTGGAGGTAGTGAAGGTCTCCCATTCTCATCACAG20.18399264029438822No Hit
AAAGAACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATTAG20.18399264029438822No Hit
AGTCTGGACGGATCAAGAAAGAAGAGTTCTCTGAGATCATGAAGATCTGT20.18399264029438822No Hit
GTTAAAGATTACACTGAAGTTCGCTTTCAGTACTATGTTCTTTTCCATGA20.18399264029438822No Hit
GAATAGTTTCGAACAAATAACATTTATGCAAGCCTTACAACTACTGCTTG20.18399264029438822No Hit
CTACAGATACACATATAGGTGCCATAGGGGAGACACACAAATTCAGACGA20.18399264029438822No Hit
GTATAAGTTTGGTCCTCCATCTGATACTAATAGCCCTACCTTTGATTGGG20.18399264029438822No Hit
GTTTAACTGCTCTATCCATGTTGTTCGGGTCCCCATTCCCATTTAGGGCA20.18399264029438822No Hit
CCAATCCACTAATCAGGCATGAAAACAGAATGGTGCTGGCTAGCACTACG20.18399264029438822No Hit
CATGGAAAGTGTCAAAAATGGGACTTATGACTACCCAAAATACTCAGAGG20.18399264029438822No Hit
TCCTTGTTGATTCCAGCTTTACCCCATCTATTTCTTCTCTGTTTAATTTT20.18399264029438822No Hit
AGAAAGCTCTTATCTCTTGTTCTACTTCAAGCAGTAGTTGTAAGGCTTGC20.18399264029438822No Hit
AAAATTCCCTTAGTCAGAGGTGACAAGATTGGTCTTGTCTTTAGCCATTC20.18399264029438822No Hit
GCCTAGGCATGAGCATGAACCAGTCTCGTGACATTTCCTCGAGGGTCATG20.18399264029438822No Hit
CATTTGTGGTAAAATTCAAAGCAGCCGTTTCCAATTTCCTTGGCATTGTT20.18399264029438822No Hit
CTTCCGTAGAAGGCCCTCTTTTCAAACCGTATTTAAAGCGACGATAAATA20.18399264029438822No Hit
GTTTTTTACTCTAGCTCTATGTTGACAAAATGACCATCGTCAACATCCAC20.18399264029438822No Hit
ATGTCAAGCTTTCAGGTAGACTGTTTCCTTTGGCATATCCGCAAGCGATT20.18399264029438822No Hit
CCATTCCACGATTTGTTTCCCAACAAGAGTGGCTGTTTCGATATCGAGGC20.18399264029438822No Hit
GTTAAATACATATTCTACACTGTAGAGACCCATTAGAGCCTGTCTCTTAT20.18399264029438822No Hit
GAGCAATAGTTGGAGAAATTTCACCATTACCTTCTCTTCCAGGACATACT20.18399264029438822No Hit
CTCTTGTTGGGAAACAAATCGTGGAATGGATCTTGAAAGAGGAATCCAGC20.18399264029438822No Hit
AAACTATTCTCTGTCGCTTTCAATCTGTGCCGCATTTCTTCAATTAACCA20.18399264029438822No Hit
GCCCTTAGTAGTATCAAGGTCTCTAATCGGTTAAAGATTACACTGAAGTT20.18399264029438822No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAAGGCTAATGTGCTAATT20.18399264029438822No Hit
AGCCAGCACCATTCTGTTTTCATGCCTGATTAGTGGATTGGTGGTAGTAG20.18399264029438822No Hit
CACTTAGAATGACAATTGCATCTGTACCTACTTCGCGCTACCTTTCTGAC20.18399264029438822No Hit
TGCATGGAAAGTGTCAAAAATGGGACTTATGACTACCCAAAATACTCAGA20.18399264029438822No Hit
TCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACA20.18399264029438822No Hit
GCATGAACCAGTCTCGTGACATTTCCTCGAGGGTCATGTCAGAAAGGTAG20.18399264029438822No Hit
GTATCAAGGTCTCTAATCGGTTAAAGATTACACTGAAGTTCGCTTTCAGT20.18399264029438822No Hit
GGATTGGGTGATGCCCCATTCCTTGATCGGCTCCGCCGAGATCAAAAGTC20.18399264029438822No Hit
CTTTCAATCTGTGCCGCATTTCTTCAATTAACCACCTTATTTCCTCAAAT20.18399264029438822No Hit
CCTCATAAGTATGTCCTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACT20.18399264029438822No Hit
GAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAA20.18399264029438822No Hit
GTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATTAGAGACCTTGAT20.18399264029438822No Hit
TTTTTACTCTAGCTCTATGTTGACAAAATGACCATCGTCAACATCCACAG20.18399264029438822No Hit
GAGAAGAAATAGATGGGGTAAAGCTGGAATCAACAAGGATTTACCAGATT20.18399264029438822No Hit
CATCAGGAAGGCAAGAGATATGGCCCAGCATTAAGCATCAATGAACTGAG20.18399264029438822No Hit
ATACAGAGATTCGCTTGGAGAAACTGTGATGAGAATGGGAGACCTTCACT20.18399264029438822No Hit
CTAATGGGTCTCTACAGTGTAGAATATGTATTTAACATTAGGATTTCAGA20.18399264029438822No Hit
CAATATCAGGTGCAAGATCCCAATGATATTTGCTGCAATGACGAGAGGAT20.18399264029438822No Hit
GTCCCAATAGTTCTCATTGCATGTACCATCTGCCTAGTCTGATTAGCAAC20.18399264029438822No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)