FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_A5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_A5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2020
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACTTG80.39603960396039606No Hit
GTCCTATCCTTGGAAAACTCTGTGCTGATTTGTACCATTATCAATTAATT50.24752475247524752No Hit
GTCCTAATTAAGAGTTATGTTTGTGAATGGGCCAAATTAATTGATAATGG50.24752475247524752No Hit
ATCACGACCTGAGCCAAAGGCAAATGCTTAATGATCCTCTATTGGTGCTT40.19801980198019803No Hit
ATATCATGATCTGGAAGGTGATTACACATGTAAATACTCATCTGCCTGTG40.19801980198019803No Hit
GTGCTAACAGTCCCTTTGAGAACTCAGCCATCCATTACACAAATCATTTG30.1485148514851485No Hit
CATGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACT30.1485148514851485No Hit
GTTGTTACATATGTGTCTTGCTCTGACATTTCAAGTCCTATTTTTAACAG30.1485148514851485No Hit
GAACAATTAATCCCAATTATACCTAACCACAGACTGGAATTTCCTTAATA30.1485148514851485No Hit
ATTCTATATCATGATCTGGAAGGTGATTACACATGTAAATACTCATCTGC30.1485148514851485No Hit
GTATTAGGGAACAGAACGAGTTACCAGGAAGCTCCCATACGGAATTTAGG30.1485148514851485No Hit
GTGTTATTATGTCTTAGGTGGAGGAAATGGTCTACGGATTCATGTTTGAA30.1485148514851485No Hit
GAGTTGGAATCCTTGATGAAAATGCCCTCATACTGCAGCTTCTGTTTCCC30.1485148514851485No Hit
CTATATCATGATCTGGAAGGTGATTACACATGTAAATACTCATCTGCCTG30.1485148514851485No Hit
GTCTTGCTCTGACATTTCAAGTCCTATTTTTAACAGGATCAGCACTGGAG30.1485148514851485No Hit
GCACTGGAGGAACGCAACAATGCATTTTATTAAGGAAATTCCAGTCTGTG30.1485148514851485No Hit
GGGTTGGTTATTGACTGAAACTGGGGATGAGGTAATGCTCTTTGTTGACT30.1485148514851485No Hit
GTTATTGACTGAAACTGGGGATGAGGTAATGCTCTTTGTTGACTTAAGTA30.1485148514851485No Hit
ATGTATGAGTTACTAATTTCCTGGACATTATCAGCCATTAGCTGGTTTCC30.1485148514851485No Hit
AGTCAACAAAGAGCATTACCTCATCCCCAGTTTCAGTCAATAACCAACCC30.1485148514851485No Hit
GGACAGGGTTGGTTATTGACTGAAACTGGGGATGAGGTAATGCTCTTTGT30.1485148514851485No Hit
AATTAAGAGTTATGTTTGTGAATGGGCCAAATTAATTGATAATGGTACAA30.1485148514851485No Hit
AGTTAATAAAGCCCTACTATTCCACCGTGCTAACAGTCCCTTTGAGAACT30.1485148514851485No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT30.1485148514851485No Hit
GATTTGTACCATTATCAATTAATTTGGCCCATTCACAAACATAACTCTTA30.1485148514851485No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)