FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_A1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_A1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1337
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACTGTACTTCCCTTCCTTCCTAGTCTAAAAGTATTGCTCTTCGACTAA80.5983545250560958No Hit
CTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACCAT70.5235602094240838No Hit
CTCTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACC60.44876589379207177No Hit
CTCATACATATGGTAAATGTTCCATTCCCAGCCAAATGATTTGTGTAATG60.44876589379207177No Hit
GTCTAGTTAATAAAGCCCTACTATTCCACCGTGCTAACAGTCCCTTTGAG60.44876589379207177No Hit
ATGTATGAGTTACTAATTTCCTGGACATTATCAGCCATTAGCTGGTTTCC50.3739715781600598No Hit
GATTAGCACACAGTCTAGTTAATAAAGCCCTACTATTCCACCGTGCTAAC40.2991772625280479No Hit
ATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTA40.2991772625280479No Hit
GCATTAAGATGTATGAGGTGTATTCCTTCCCCATCTTGGGAATTCTAGTT40.2991772625280479No Hit
GTACTAGTGTAATTATGCGGGTGAAACCCTTTGTTAAAATTTTGGAAGTT40.2991772625280479No Hit
GTGTATGGTTAGGATTTGCATCTTTCACTTGCTGAATGTAAGAAGCACCA40.2991772625280479No Hit
CCTTTAACCCCTAGGCTAAAGGGAAACCTTGACGATTACCTAGCTACTGG40.2991772625280479No Hit
CCATTACACAAATCATTTGGCTGGGAATGGAACATTTACCATATGTATGA30.22438294689603588No Hit
GTCCTAGAAACCTATGAACCATGTTTAAGCATTTCACCCTCCAGAAGCCC30.22438294689603588No Hit
GCTTAATGATCCTCTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGC30.22438294689603588No Hit
GAATACTTAAGTCAACAAAGAGCATTACCTCATCCCCAGTTTCAGTCAAT30.22438294689603588No Hit
GCTGTAGATAAAGCTGTCTAGAGGAAATTGTATAGCCTTAAACACACATT30.22438294689603588No Hit
GTGTATTCCTTCCCCATCTTGGGAATTCTAGTTAGTCGAAGAGCAATACT30.22438294689603588No Hit
GTGCAGGCCTCGATCCCAGGAATCTGGGATCACGACCTGAGCCAAAGGCA30.22438294689603588No Hit
CCTATGAACCATGTTTAAGCATTTCACCCTCCAGAAGCCCCAGTAGCTAG30.22438294689603588No Hit
ATCACGACCTGAGCCGAAGGCAGACACTTAACAGACTGAGCCTGTCTCTT30.22438294689603588No Hit
GTACAAATCAGCACAGAGTTTTCCAAGGATAGGACAGGGTTGGTTATTGA30.22438294689603588No Hit
TCCAAATACATAACCACTGTACTTCCCTTCCTTCCTAGTCTAAAAGTATT30.22438294689603588No Hit
CTCTGGCCTTTTCTCATATGCATTTGACAAAAGAACTACTGATGGAGTGT20.14958863126402394No Hit
CTATTCCACCGTGCTAACAGTCCCTTTGAGAACTCAGCCATCCATTACAC20.14958863126402394No Hit
GGATAGGACAGGGTTGGTTATTGACTGAAACTGGGGATGAGGTAATGCCT20.14958863126402394No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTCTGAG20.14958863126402394No Hit
GTGTAGAAAGGAGAGAAATATCAAGGCTTGTCTCCTAACCACCCCTCCCA20.14958863126402394No Hit
CTGTTAGCACGGTGGAATAGTAGGGCTTTATTAACTAGACTGCTGTCTCT20.14958863126402394No Hit
GGTATGAGCATATCTGAACTCCTGCTGTGGAATGTGTAGCAAGTGAATTA20.14958863126402394No Hit
CATATGGTAAATGTTCCATTCCCAGCCAAATGATTTGTGTAATGGATGGC20.14958863126402394No Hit
TGTTTGAAATGTGCAATATTGGCAATCAAGACTTACCTCAGCATTTGCTG20.14958863126402394No Hit
GGTCACCACTTCCTCTCTGCCTGATATGTTCTCTTTTCTGGTTTTCCTAT20.14958863126402394No Hit
GTTGTTACATATGTGTCTTGCTCTGACATTTCAAGTCCTATTTTTAACAG20.14958863126402394No Hit
GAGCAAAAGCAGGGACTTTTGGGCAGCATTAAGATGTATGAGGTGTATTC20.14958863126402394No Hit
GGCTAATAGAAGGTAGAAAGTCAATTAGAGACGATTACAAACTAACTGAC20.14958863126402394No Hit
GTAAATGTTCCATTCCCAGCCAAATGATTTGTGTAATGGATGGCTGAGTT20.14958863126402394No Hit
GGATAGGACAGGGTTGGTTATTGACTGAAACTGGGGATGAGGTAATGCTC20.14958863126402394No Hit
ACCTGAGCCAAAGGCAAATGCTTAATGATCCTCTATTGGTGCTTCTTACA20.14958863126402394No Hit
GTTATTATGTCTTAGGTGGAGGAAATGGTCTACGGATTCATGTTTGAAAT20.14958863126402394No Hit
CAACTGCATTTTTGACATCCTCATAAGTATGTCCTGGAAGCTGTCTCTTA20.14958863126402394No Hit
GTCTGCCTTTGACTCAGTTCATGATCGCAGGGTCCTGGGCTGTCTCTTAT20.14958863126402394No Hit
TTTCAAACATGAATCCGTAGACCATTTCCTCCACCTAAGACATAATAACA20.14958863126402394No Hit
GGAATGTTGTTACATATGTGTCTTGCTCTGACATTTCAAGTCCTATTTTT20.14958863126402394No Hit
GGTCATAATCTCAGGATCCTGCGATTGAGCCCTGCGTTGGGCCTGTCTCT20.14958863126402394No Hit
GCACTGGAGGAACGCAACAATGCATTTTATTAAGGAAATTCCAGTCTGTG20.14958863126402394No Hit
TGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACTTG20.14958863126402394No Hit
CTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGA20.14958863126402394No Hit
GCTTACAGTGAGCGGCATTCCATAGTGTGCATGTTCATTTTGTAGGTTCT20.14958863126402394No Hit
ATGTTCCATTCCCAGCCAAATGATTTGTGTAATGGATGGCTGAGTTCTCA20.14958863126402394No Hit
AAACAAGGATTAGCACACAGTCTAGTTAATAAAGCCCTACTATTCCACCG20.14958863126402394No Hit
GAGCAAAAGCAGGGACTTTTGGGCAGCATTAAGACTGTCTCTTATACACA20.14958863126402394No Hit
GTCTAGAGGAAATTGTATAGCCTTAAACACACATTTGAAAAAAAGGGCTA20.14958863126402394No Hit
ATATTGGCAATCAAGACTTACCTCAGCATTTGCTGGGACACAGGAAACCA20.14958863126402394No Hit
ACAAAAGACTGATCAAGAGATTGAAGCAAGAAGGGGAAAAGAAACCTATA20.14958863126402394No Hit
GTTTAGGGCGCCTGGGTGGCTCAGTCAGCTAAGCATCTGCCTTTAGTGCC20.14958863126402394No Hit
AACTAGAATTCCCAAGATGGGGAAGGAATACACCTCATACATCTTAATGC20.14958863126402394No Hit
GTGTAATGGATGGCTGAGTTCTCAAAGGGACTGTTAGCACGGTGGAATAG20.14958863126402394No Hit
GAGTGTTATTATGTCTTAGGTGGAGGAAATGGTCTACGGATTCATGTTTG20.14958863126402394No Hit
GCCCTGGGTTGGTCCATTTCCTCTCAGCTGGCCAGGTGAAGAACCTGTCT20.14958863126402394No Hit
GAATGGAACATTTACCATATGTATGAGTTACTAATTTCCTGGACATTATC20.14958863126402394No Hit
GCTAATGGCTGATAATGTCCAGGAAATTAGTAACTCATACATATGGTAAA20.14958863126402394No Hit
GGCTGATAATGTCCAGGAAATTAGTAACTCATACATATGGTAAATGTTCC20.14958863126402394No Hit
GTCTTAGGTGGAGGAAATGGTCTACGGATTCATGTTTGAAATGTGCAATA20.14958863126402394No Hit
GTAATTATGCGGGTGAAACCCTTTGTTAAAATTTTGGAAGTTTGGTTGAA20.14958863126402394No Hit
CATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACTTGCTGAATGTAA20.14958863126402394No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA20.14958863126402394No Hit
GGCCTTTTCTCATATGCATTTGACAAAAGAACTACTGATGGAGTGTTATT20.14958863126402394No Hit
GTGTACTAGTGTAATTATGCGGGTGAAACCCTTTGTTAAAATTTTGGAAG20.14958863126402394No Hit
TCTCTAACAGGCTAGTGTCTTCACCCTGCTGCATTGTGACTAGCACCTAT20.14958863126402394No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)