FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P2_H4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P2_H4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT24.651162790697675No Hit
GAGCAAAAGCAGGTCAATTATATTCAATATGGAGAGAATCTGTCTCTTAT12.3255813953488373No Hit
AACAAGGACAAACCCTCTGGAGCAAAACAAACGATGCTGGATCAGACCGA12.3255813953488373No Hit
CACTACGTCCCCAAGCCAAAATAGAAAATTACCGTTCTCTCCATTTGCAA12.3255813953488373No Hit
GTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGA12.3255813953488373No Hit
ATTTAAAGCATCTGACAAATGAAAAGGTCATGATCACACTCTTAATCTAA12.3255813953488373No Hit
CATCTGTGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAA12.3255813953488373No Hit
GGAATGGCCCAACAACAAGTACAGTTCATTACCCTAAGGTATATAACTGT12.3255813953488373No Hit
TCCTTATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTCTGTCTCT12.3255813953488373No Hit
TCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTG12.3255813953488373No Hit
CCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCAT12.3255813953488373No Hit
GTCATAAGTTAATTTGACCATACATGCATAAGTGTATTTTGGGGCCCTCT12.3255813953488373No Hit
GTTCATTACCCTAAGGTATATAAAACTTATTTCGAAAAGGTCGAAAGGTG12.3255813953488373No Hit
CATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCA12.3255813953488373No Hit
GATGGCCATCAATTAGTTGTCGAATAGTTTAAAAACGACCTTGTTTCTAC12.3255813953488373No Hit
CACGAGACTGGTTCATGCTCATGCCTAGGCAAAAGATAATAGGCCCTCTT12.3255813953488373No Hit
AAGTAATACTGGACTAAAAAAGGGAAGTAAGGCAAAGCTGAGACACATGG12.3255813953488373No Hit
CTCCAGTATTCAATTACAACAAGGCAACCAAACGACTTACAGTTCTTGGA12.3255813953488373No Hit
GCATCAATGAACTGAGCAATCTGCAAAAGGAGAGAACGCTAATGTGCTAA12.3255813953488373No Hit
AGAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAA12.3255813953488373No Hit
GTGTCCATCAAAGTCCAAGTGCCCAACATGTAGGATAAGACTGAATGGAA12.3255813953488373No Hit
CATTAACTAATCAATATTAACTAATAAGTCTAAATACAAAAAAACAAATC12.3255813953488373No Hit
ATAAAACTTATATCGAAAAGTTCGAAAGGTGAAATTCTCCAGTATTCAAT12.3255813953488373No Hit
CCATAAAACTGGAGATCCTCAATACAGCCATGCAACAGCACAAGAAGAAA12.3255813953488373No Hit
GGCAATGAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGATTC12.3255813953488373No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA12.3255813953488373No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG12.3255813953488373No Hit
AATATGGAGAGAATAAAAGAATTCGGATGGCCATCAATTAGTTGTCGAAT12.3255813953488373No Hit
CATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAA12.3255813953488373No Hit
GAATTCATTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGT12.3255813953488373No Hit
ACAAAACATGGTGTATACATACAATGGCATATTACTTGGTCTTCAGATGG12.3255813953488373No Hit
TTATATACCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATT12.3255813953488373No Hit
CCCAATTACAGCAGACAAGAGAATAATATGGCCCAGCATTAAGCACCAAT12.3255813953488373No Hit
TTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTC12.3255813953488373No Hit
GAGCAAAAGCAGGTCAATTATATTCAATATGGAGAGAATAAAAGAACTGA12.3255813953488373No Hit
AGACAAGAGAATAATATGGCCCAGCATTAAGCATCAATGAACTGAGCAAT12.3255813953488373No Hit
ACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATT12.3255813953488373No Hit
ACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACA12.3255813953488373No Hit
GGAAAGGATGCAGGTGCATTGACTGAAGATCCAGATGAAGGCACATCTGG12.3255813953488373No Hit
CAACTGGATCATAAGTCAAAGCACCTCCAACATTTACAAGAAATTTAACA12.3255813953488373No Hit
AGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCC12.3255813953488373No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCTGTCTCT12.3255813953488373No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)