FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P2_G6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P2_G6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTAGTGAGTAT33.4482758620689653No Hit
CAAGTACAGTTCATTACCCTAAGGTATATAAAACTTATTTCGAAAAGGTC22.2988505747126435No Hit
ATACTAGATAGCAACATCACACTTTTAACAGAAGAACCTTTGATCTGTCT22.2988505747126435No Hit
GTAGAAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATC22.2988505747126435No Hit
ATATGGAGAGAATAGAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACT22.2988505747126435No Hit
ATTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCC22.2988505747126435No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA22.2988505747126435No Hit
GCTTAATGCTGGGCCATATTATTCTCTTGTCTGCTGTAATTGGGTATCTC11.1494252873563218No Hit
ATTATATTCAATATGGAGAGAATAAAAGAATTCGGATGGCCATCAATTAG11.1494252873563218No Hit
ACTCAGGAGTCCCTGGTATAGCTATTTTAGAGAACAATTCAATACCTGTC11.1494252873563218No Hit
ATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTA11.1494252873563218No Hit
ATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGAT11.1494252873563218No Hit
TATCCCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTCAGGACAGCAGA11.1494252873563218No Hit
CTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAG11.1494252873563218No Hit
GAGGGTTTGTCCTTGTTCATTCCTCTCTGGAATCATGTCCATTATTAACT11.1494252873563218No Hit
CTATCTGGCCTATTTTTAGTCATTGCCTATTAGTTTCCTACTGTGAGCGA11.1494252873563218No Hit
AGTTTGCTGCAATGTATTCAACAGTCTATATGCGTCTCCACAACTTGAGG11.1494252873563218No Hit
AAACAAACGATGCTGGATCAGACCGAGTGATGGTATCACCTCTGGCCGTA11.1494252873563218No Hit
ATACAAAAGAGTGAAACTGGACCACTACCCAACCTGTCTCTTATACACAT11.1494252873563218No Hit
GTACAATCTCCTGTTGACCATTATTGAGAACCTGAATTTAATATTGTACA11.1494252873563218No Hit
TAGAAGCACTGAAACTAAAGAAAATGGTGGAAGAAAGTTGGTGCCATATA11.1494252873563218No Hit
GTGGAGGCCATGGTGTCTAGGGCCCGGATTGATGCCAGGGTCGACTTCGA11.1494252873563218No Hit
ACCCTGGCATCAATCCGGGCCCTAGACACCATGGCCTCCACCACTGTCTC11.1494252873563218No Hit
GTCCTGTGCCTTGGTCCCCCTTATCTGACTATGTGCACAAGATGATGTCT11.1494252873563218No Hit
GGATGCAGGTGCATTGACTGAAGATCCAGATGAAGGCACATCTGGGGTGG11.1494252873563218No Hit
CCTGTTGACCATTATTGAGAACCTGAATTTAATATTGTACAAAATGCCAC11.1494252873563218No Hit
ACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCCTGTCTC11.1494252873563218No Hit
AAGATATGCATCTTGGAGACACTCATGAGCAAACCGCACATCAGAGGAAT11.1494252873563218No Hit
GAATACTGGAGAATTGCACCTTTCGACCTTTTCGAAATAAGTTTTATATA11.1494252873563218No Hit
AGTCTGGACGGATCAAGAAAGAAGAGTTCTCTGAGATCATGAAGATCTGT11.1494252873563218No Hit
GCTCAGGTCATGGTCCTGGAGTCCCGGGATGGAGTCCCACAAGGGGCTCC11.1494252873563218No Hit
ATTTCCAGGTGATCATCACGCCCAAGTCAAAAAGTCAGTGTACTTCCCAA11.1494252873563218No Hit
GTAGAAACAAGGTACTTTTTTGGACAGTATGGATAGCTGTCTCTTATACA11.1494252873563218No Hit
GATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGA11.1494252873563218No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT11.1494252873563218No Hit
CATATATACAGTATAGTGACTCAGCAGTTACTCAGAGCTTCTCACAGAAA11.1494252873563218No Hit
AATAAAAGAATTCGGATGGCCATCAATTAGTTGTCGCTGTCTCTTATACA11.1494252873563218No Hit
GCATCGTGTTTGTCGTCCACTTTCCCTTTTCTGAGTATTGGTGTGTTCTG11.1494252873563218No Hit
ATTGGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTTCTT11.1494252873563218No Hit
GGAATGAACAAGGACAAACCCTCTGGAGCAAAACAAACGATGCTGGATCA11.1494252873563218No Hit
CCTTCAGCTCAGGCCATGACCCCGGGTCCTGGGATCGAGCCCCACATCGG11.1494252873563218No Hit
GCTTCATATAGCCCCCCAAGATCGAAGGTTCCAGGTTCCAGGTTGTCCCT11.1494252873563218No Hit
GTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTATTC11.1494252873563218No Hit
GTGCTAATTGGGCAAGGGTACGTAGTGTTGGTAATGAAACGAAAACGGGA11.1494252873563218No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC11.1494252873563218No Hit
CCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGCTGTCTCTTATA11.1494252873563218No Hit
TCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGC11.1494252873563218No Hit
GCCTTGAGATATAGTCATGAAAGTGACTAAGGAATATGTCTGTCTCTTAT11.1494252873563218No Hit
ATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGC11.1494252873563218No Hit
GTATCACCTCTGGCCGTAACATGGTGGAATAGGAATGGCCCAACAACAAG11.1494252873563218No Hit
ATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCC11.1494252873563218No Hit
GAAAGAATATGGGGAAGATCCGAAAATCGAAACTAACAAGTTTGCTGCAA11.1494252873563218No Hit
GTTCATTACCCTAAGGTATATAAAACTTATTTCGAAAAGGTCGAAAGGCT11.1494252873563218No Hit
GCCGAAGGCAGACACTTAACAGACTGAGCCACCCAGGCGCCCTGTCTCTT11.1494252873563218No Hit
ACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTT11.1494252873563218No Hit
TTACAGCAGACAAGAGAATAATGGACATGATTCCAGAGAGGAATGAACAA11.1494252873563218No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCCT11.1494252873563218No Hit
GGGTAAAAGACAGAAGGTAGAAGGAAAAAAGGAGAAAAAAAAGGACAGGA11.1494252873563218No Hit
AGTTGGTGCCATATAGACACATTTCTTGAGATATGAGAAGGCAAAAAAAA11.1494252873563218No Hit
TGTCAATCCGACTCTACTTTTCCTAAAATTCCAGCGCAAAATGCCATAAG11.1494252873563218No Hit
CTTGTACAGGGTGTGCAAATTCCTTCTTTTAATGACACTACCCCAGGATA11.1494252873563218No Hit
CCATCAATTAGTTGTCGAATAGTTTAAAAACGACCTTGTTTCTACCTGTC11.1494252873563218No Hit
GTCCCACTTTTCATAATTTCTAAGGTATTAGTCTAATACCTGTCTCTTAT11.1494252873563218No Hit
AGTAGAAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCAT11.1494252873563218No Hit
ACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAA11.1494252873563218No Hit
GTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAA11.1494252873563218No Hit
TGGTTGCCTTGTTGTAATTGAATACTGGAGAATTGCACCTTTCGACCTTT11.1494252873563218No Hit
AAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAA11.1494252873563218No Hit
GAGCAAAAGCAGGTCAATTATATTCAATATGGAGAGAATAAAAGAACTGA11.1494252873563218No Hit
GTTCTCCAGTCTCCTCGGCCGCAGCCGCCTCCCAATTCCCTCCGCTCCCC11.1494252873563218No Hit
GCAAAAGCAGGGGGAGCAGCAGAGGGAGAGGAGGAAGCAGGCTCCCCACT11.1494252873563218No Hit
ATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGACCT11.1494252873563218No Hit
TGTTTCTACTAATAACCCGAGTAGAAACAAGGCCGTTTTTAAACTATTCG11.1494252873563218No Hit
AGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGA11.1494252873563218No Hit
AGCAGGTACTGATCCAAAATGGAAGACTTTGTGCGACAATGCTTCAATCC11.1494252873563218No Hit
ATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAGCTGTCTCTTATA11.1494252873563218No Hit
GATTTTTTTTTTTGCCTTCTCATATCTCAAGAAATGTGTCTATATGGCAC11.1494252873563218No Hit
CTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATAT11.1494252873563218No Hit
GCAATAATTGGTGTCCTTTGTTAAGCGCTATTATGTGTCCTAGAAACCCT11.1494252873563218No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)