FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P2_E6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P2_E6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1194
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGA60.5025125628140703No Hit
AATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGA60.5025125628140703No Hit
GTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTA60.5025125628140703No Hit
GCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAAC50.41876046901172526No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC50.41876046901172526No Hit
CAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCA50.41876046901172526No Hit
CCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACC50.41876046901172526No Hit
GTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGGCCC50.41876046901172526No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA40.33500837520938026No Hit
CTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAG40.33500837520938026No Hit
GTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACCTGTCTCTTATAC30.25125628140703515No Hit
GACTTACAGTTCTTGGAAAGGATGCAGGTGCATTGACTGAAGATCCAGAT30.25125628140703515No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG30.25125628140703515No Hit
GACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGC30.25125628140703515No Hit
CTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAA30.25125628140703515No Hit
GAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAG30.25125628140703515No Hit
TTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGC30.25125628140703515No Hit
CTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCA30.25125628140703515No Hit
GCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATC30.25125628140703515No Hit
GTAGAAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATC30.25125628140703515No Hit
GTTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGT20.16750418760469013No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAA20.16750418760469013No Hit
TTACAGTTCTTGGAAAGGATGCAGGTGCATTGACTGAAGATCCAGATGAA20.16750418760469013No Hit
GGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATCTCTCA20.16750418760469013No Hit
GGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGA20.16750418760469013No Hit
GACCAAAAGAATTCGGATGGCCATCAATTAGTTGTCGAATAGTTTAAAAA20.16750418760469013No Hit
GTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGT20.16750418760469013No Hit
GTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAA20.16750418760469013No Hit
GTTGTCGAATAGTTTAAAAACGACCTTGTTTCTACCTGTCTCTTATACAC20.16750418760469013No Hit
GAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAA20.16750418760469013No Hit
CTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATC20.16750418760469013No Hit
GGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGA20.16750418760469013No Hit
GTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATCTGT20.16750418760469013No Hit
CTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTG20.16750418760469013No Hit
GTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATCTCT20.16750418760469013No Hit
ATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACAACTTCCATAATCAC20.16750418760469013No Hit
ACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATC20.16750418760469013No Hit
TCCTTGTTCATTCCTCTCTGGAATCATGTCCATTATTCTCTTGTCTGCTG20.16750418760469013No Hit
GTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGA20.16750418760469013No Hit
CAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTC20.16750418760469013No Hit
CTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTTT20.16750418760469013No Hit
GAACAAGGACAAACCCTCTGGAGCAAAACAAACGATGCTGGATCAGACCG20.16750418760469013No Hit
GATCTGTGGAATAACATCAAGAGACCTATCATTTGGTATAACTGGAATCC20.16750418760469013No Hit
GTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCAT20.16750418760469013No Hit
TTCCTATTCCACCATGTTACGGCCAGAGGTGATACCCTGTCTCTTATACA20.16750418760469013No Hit
CGTAGGGTGCCTGGGTGGCTCAGTCGGTTAAGTGTCCGACTTGATTTTGG20.16750418760469013No Hit
ATATACCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCC20.16750418760469013No Hit
ATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTC20.16750418760469013No Hit
TGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTC20.16750418760469013No Hit
GTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTT20.16750418760469013No Hit
ATATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCAC20.16750418760469013No Hit
CGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCATTCCTCTCTGGAATC20.16750418760469013No Hit
CTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTAGTGAGTATCTGTC20.16750418760469013No Hit
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTA20.16750418760469013No Hit
AGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGA20.16750418760469013No Hit
CATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAAT20.16750418760469013No Hit
GTCTGGCCGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAA20.16750418760469013No Hit
GGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAATGGAC20.16750418760469013No Hit
GTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATCTCTCAG20.16750418760469013No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT20.16750418760469013No Hit
TTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTATTC20.16750418760469013No Hit
CCCAATTACAGCAGACAAGAGAATAATATGGCCCAGCATTAAGCATCAAT20.16750418760469013No Hit
ACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTT20.16750418760469013No Hit
GAACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAAC20.16750418760469013No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)