FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P2_E1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P2_E1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1392
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA100.7183908045977011No Hit
CCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACC90.646551724137931No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA60.43103448275862066No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG50.35919540229885055No Hit
GTAGAAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATC50.35919540229885055No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT50.35919540229885055No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAA40.28735632183908044No Hit
ATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAAT40.28735632183908044No Hit
GATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCATTCCT40.28735632183908044No Hit
GAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGA30.21551724137931033No Hit
AATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGA30.21551724137931033No Hit
CACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGA30.21551724137931033No Hit
GTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGG30.21551724137931033No Hit
GACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGC30.21551724137931033No Hit
GAATAATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAA30.21551724137931033No Hit
GAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAG30.21551724137931033No Hit
GTGGAATAGGAATGGCCCAACAACAAGTACAGTTCATTACCCTAAGGCTG30.21551724137931033No Hit
TTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTC30.21551724137931033No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC30.21551724137931033No Hit
ATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGCCC30.21551724137931033No Hit
CATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAAT30.21551724137931033No Hit
GGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTAC30.21551724137931033No Hit
GTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGGCCC30.21551724137931033No Hit
GGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGC30.21551724137931033No Hit
TCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGCTGTCT20.14367816091954022No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG20.14367816091954022No Hit
CTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCT20.14367816091954022No Hit
ATGTGTGGCTAGACGTAACCAAGCTAACCCATGTTGTATACTAATGTTCC20.14367816091954022No Hit
GGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGA20.14367816091954022No Hit
ATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCAAGGGGACGTA20.14367816091954022No Hit
ACTCAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACA20.14367816091954022No Hit
GTTACGGCCAGAGGTGATACCATCACTCGGTCTGATCCAGCATCGTTTGT20.14367816091954022No Hit
CATGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACT20.14367816091954022No Hit
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCCTGTCTCTTATA20.14367816091954022No Hit
CTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTAGTGCTGTCTCTTA20.14367816091954022No Hit
CAGGGAGCCTGCTTCCCCCTAGGCCTGATCTGCCTGCTGCTCCCCCTGCT20.14367816091954022No Hit
GTATCACCTCTGGCCGTAACATGGTGGAATAGGAATGGCCCAACAACAAG20.14367816091954022No Hit
GTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAA20.14367816091954022No Hit
TCTCAGGACAGCAGACTCCACCCCAGATGTGCCTTCATCTGGATCTTCAG20.14367816091954022No Hit
GCCCCAGTAGCTAGGTAATCGTCAAGGTTTCCCTTTAGCCTAGGGGTTAA20.14367816091954022No Hit
GAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGT20.14367816091954022No Hit
CTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAG20.14367816091954022No Hit
AGTAGAAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCAT20.14367816091954022No Hit
AAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGT20.14367816091954022No Hit
AGATGAAGGCACATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCA20.14367816091954022No Hit
CTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAA20.14367816091954022No Hit
ACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATT20.14367816091954022No Hit
TTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTT20.14367816091954022No Hit
CAAGAGAATAATGGACATGATTCCAGAGAGGAATGAACAAGGACAAACCC20.14367816091954022No Hit
GACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGA20.14367816091954022No Hit
GGTGATACCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAGAG20.14367816091954022No Hit
CCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCAC20.14367816091954022No Hit
TTGACTGAAGATCCAGATGAAGGCACATCTGGGGTGGAGTCTGCTGTCCT20.14367816091954022No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGC20.14367816091954022No Hit
CCCCACTCAGCAGAGAGCCCGATGCGGGGCTCGATCCCAGGACCCTGAGA20.14367816091954022No Hit
GGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATA20.14367816091954022No Hit
GTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCAT20.14367816091954022No Hit
CCGTAACATGGTGGAATAGGAATGGCCCAACAACAAGTACAGTTCATTAC20.14367816091954022No Hit
GCTTAATGCTGGGCCATATTATTCTCTTGTCTGCTGTAATTGGGTATCTC20.14367816091954022No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTGTC20.14367816091954022No Hit
ATAGAGGCACTGAAACTAAAGAAAATGGTGGAAGAAAGTTGGTGCCATAT20.14367816091954022No Hit
CCAGAGGGTTTGTCCTTGTTCATTCCTCTCTGGAATCATGTCCATTATTC20.14367816091954022No Hit
GTTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTATT20.14367816091954022No Hit
ATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACTTCAT20.14367816091954022No Hit
GCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAAC20.14367816091954022No Hit
TAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTC20.14367816091954022No Hit
ACATCGGGCTCCTTGCTCAGCGGGGAGCCTGCTTCTCCCTCTGCCTGCCT20.14367816091954022No Hit
AAGAAGACAAGAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAAT20.14367816091954022No Hit
ATCCCAGGACCATGGGATCACAACCTGAGCTGAAGGCAAGCACTTTAATG20.14367816091954022No Hit
TCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACA20.14367816091954022No Hit
GTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGA20.14367816091954022No Hit
GCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATC20.14367816091954022No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA20.14367816091954022No Hit
CAATGCACCTGCATCCTTTCCAAGAACTGTAAGTCGTTTGGTTGCCTTGT20.14367816091954022No Hit
CATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATG20.14367816091954022No Hit
GAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAA20.14367816091954022No Hit
GCCATATGGTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTG20.14367816091954022No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)