FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P2_B1_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P2_B1_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1012
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA60.592885375494071No Hit
GAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGA50.4940711462450593No Hit
GCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAAC40.3952569169960474No Hit
CCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCAT40.3952569169960474No Hit
TCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACA40.3952569169960474No Hit
GCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATC40.3952569169960474No Hit
ATTGTGGACCATATGGCCATAATCAAAAAGCTGTCTCTTATACACATCTG30.2964426877470355No Hit
CCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGT30.2964426877470355No Hit
CCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCA30.2964426877470355No Hit
CTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAG30.2964426877470355No Hit
GTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTA30.2964426877470355No Hit
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTCTGTCTC30.2964426877470355No Hit
CCCAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGAGAGGAATG30.2964426877470355No Hit
GTTCATTGATGCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAA30.2964426877470355No Hit
TTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTC30.2964426877470355No Hit
TACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTT30.2964426877470355No Hit
GTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGA30.2964426877470355No Hit
CTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATT30.2964426877470355No Hit
CTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCCATCAATTA30.2964426877470355No Hit
GTCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGACCATATGGCCA30.2964426877470355No Hit
CCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACC30.2964426877470355No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT30.2964426877470355No Hit
GTCCTGGGATCCAGACCCACGTCAGGCTCCCGGCTCAGTGGGAAGCCCGC20.1976284584980237No Hit
AATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGA20.1976284584980237No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG20.1976284584980237No Hit
GGCTCAGTCTGTTAAGTGTCTGCCTTCGGCTCAGGTCATGATCCCAGGGT20.1976284584980237No Hit
CTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCT20.1976284584980237No Hit
TGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGT20.1976284584980237No Hit
TCTTCAGTCAATGCACCTGCATCCTTTCCAAGAACTGTAAGTCGTTTGGT20.1976284584980237No Hit
ATGAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGA20.1976284584980237No Hit
GTCGTAGTGATATGTAGGTATGGTCCATGGTCTTCTTTTCCCTCTTTTTG20.1976284584980237No Hit
GATTAGGAGTACACTTTCTGTGAGAAGCTCTGAGTAACTGCTGAGTCACT20.1976284584980237No Hit
TGCTTAATGCTGGGCCATATTATTCTCTTGTCTGCTGTAATTGGGTATCT20.1976284584980237No Hit
GTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGA20.1976284584980237No Hit
CATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAA20.1976284584980237No Hit
GACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATCTGTCTCTT20.1976284584980237No Hit
ACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCA20.1976284584980237No Hit
ATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCATTCCTC20.1976284584980237No Hit
GCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTA20.1976284584980237No Hit
TTTCATTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCT20.1976284584980237No Hit
ACACTGTGGTAATAATGAGGCAGGAGTTGGAGGGAAGAGGAGGCTAGTGA20.1976284584980237No Hit
GAATAATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAA20.1976284584980237No Hit
ACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTTGC20.1976284584980237No Hit
CCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTAGT20.1976284584980237No Hit
GATATGGCCCAGCATTAAGCATCAATGAACCTGTCTCTTATACACATCTG20.1976284584980237No Hit
ACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTA20.1976284584980237No Hit
ACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGA20.1976284584980237No Hit
CACTGGAATTAAAAACAAAGATATGCATCTTGGAGACACTCATGAGCAAA20.1976284584980237No Hit
AGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTA20.1976284584980237No Hit
TGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGGCCCAGCA20.1976284584980237No Hit
GGCAAGAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGC20.1976284584980237No Hit
TTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCT20.1976284584980237No Hit
CAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTG20.1976284584980237No Hit
CTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCG20.1976284584980237No Hit
TGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTC20.1976284584980237No Hit
GTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTT20.1976284584980237No Hit
TTCCTATTCCACCATGTTACGGCCAGAGGTGATACCATCACTCGGTCTGA20.1976284584980237No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC20.1976284584980237No Hit
CTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACC20.1976284584980237No Hit
GCAGACTCCACCCCAGATGTGCCTTCATCTGGATCTTCAGTCAATGCACC20.1976284584980237No Hit
CAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGA20.1976284584980237No Hit
CTCCAGTATTCAATTACAACAAGGCAACCAAACGACTTACAGTTCTTGGA20.1976284584980237No Hit
GAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAA20.1976284584980237No Hit
GCAAAAGCAGGGCGAGCAGCAGAGACTCCCTGAACAGGGAGCCCAAGGCG20.1976284584980237No Hit
GAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCA20.1976284584980237No Hit
GTATTTGTACTGTGACTGGCTCCCTCAGTTGTACCCGCGGTGCAGGACCA20.1976284584980237No Hit
CTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACTTCATTCT20.1976284584980237No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)