FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_H9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_H9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76
Sequences flagged as poor quality0
Sequence length151
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTCAGGGAGGCCCGAGAAGACCCCCGCACTCAGAATGACGTGGATGTTG11.3157894736842104No Hit
CCGTCGTCGTTTCATTACCAAAACTACGTCCCCGTGCCCAATTAGCAAAT11.3157894736842104No Hit
TTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGC11.3157894736842104No Hit
GGGCCATATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCA11.3157894736842104No Hit
CCATTTAACCTTTAATTACCAACACTACGTCCACTTCACACATTAGAACA11.3157894736842104No Hit
CTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAG11.3157894736842104No Hit
GTCAATGCACCAGCATCCATTCCAATAACTGTAAGTCGTTTGGTTGCCTT11.3157894736842104No Hit
TCCAGATGAAGGCACATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATTTC11.3157894736842104No Hit
CTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAA11.3157894736842104No Hit
CCCCTGCACCTCTGGCCCTGTCCTGTCCTCGGACGCTGCTTCAACCCAGT11.3157894736842104No Hit
CCAAATTACAGAAGACAAGACAATAATGGACATTATTCCAGAGAGGAATG11.3157894736842104No Hit
TCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACTTCATTC11.3157894736842104No Hit
CCCGGGGCGCCTGCCGGCGGCGGGGGGGGGGGGGCCGCGCCCGCCGGGGG11.3157894736842104No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.3157894736842104No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA11.3157894736842104No Hit
ATGCTAGAGTACCGTTTTCGTTTCATTACCAACACTACGTACCCTTGCCC11.3157894736842104No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT11.3157894736842104No Hit
TGCTTGGTGGTTCCGGTGTGGGGGCGGGTGGGGGGGGGGGGTGTGGGGTG11.3157894736842104No Hit
ACTCTGGACCATATGGCCATAATCAAAAAGAAAACAACAGGAAGGCAAGA11.3157894736842104No Hit
AATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGA11.3157894736842104No Hit
ACCCTGGCTACATATTGCCATCAGCAGAGGAAGTATAAAAAATACCAATG11.3157894736842104No Hit
CAACACTACGTCCCCTTGCCCATTTAGCACAGTAGCGTTCTCTCCTTTTG11.3157894736842104No Hit
GCTGTCAGTAAGTATTCTAGAGTACCGTTTACGTTTCATTACCAAACCAA11.3157894736842104No Hit
GACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGA11.3157894736842104No Hit
ACAATTAACTGAGAAATCTTGCAAAAGGAGAGAACGCTAAAGTGCTCATT11.3157894736842104No Hit
GTTGGTGCTGAAGCGGGGTGGGGGGGCTGGGTGGGGTTGGGTGGGCGTGG11.3157894736842104No Hit
CTTATTTCGAAAAGGTCGAAAGGTGCAATTCTCCAGTATTCAATTACAAC11.3157894736842104No Hit
ATCACTGAGCCCACTGTGGACCGTCTGGCGCGCATCAAGAGGGCCACTGC11.3157894736842104No Hit
ATCCACTTCCTTCCGAGGGCGGGGTTCTTCTCTTGCCTTCCTGATGCGGT11.3157894736842104No Hit
GGGGTAAGGGGCGGTGGGGGGGGGAGTCGGGGGGTGGGGGCGGGGGGGCG11.3157894736842104No Hit
GCTGGGGCCGAGCGGGGGGGTCCGGGAGCCGGAGCGCCCGCGGCGCCCAC11.3157894736842104No Hit
GCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAACTGTCTC11.3157894736842104No Hit
GTCTGGTAGTGGGCCGTTTTCGTGTCATTCCCTGGACTCGGTCCGCTTGC11.3157894736842104No Hit
GAGAAGAACCCCGCACTCAGAATGAAGTGGATGATTGCAATGAGATACCC11.3157894736842104No Hit
AGTAGCACATTAGCGGTCTCTCCTTTTGCAAGATTGCGGCGGTCCTTGAT11.3157894736842104No Hit
GTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTAGTGAGTATCT11.3157894736842104No Hit
GAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCAAGGGG11.3157894736842104No Hit
CAAAATTAGAGAAATCTAATAAATCTAGTCTCCACACTACAATCGCTGTC11.3157894736842104No Hit
CCTCATAGGATTAATAATTATAAGCAAACAACAAAATAAAAATAAACCAC11.3157894736842104No Hit
GGGTTTGTCCTTGTTCATTCCTCACTGGAATCATGTACATTATTCTCTTG11.3157894736842104No Hit
GTACTTGTATTTGGGACATACCAAATCCAACATGTAAAGGACAGACGAGA11.3157894736842104No Hit
TGTGTCAAGGTGGCGGCCTCTCTGTGATGGCCAGGCGCAGGGGGGGGGGG11.3157894736842104No Hit
CTTCTTCTCTTTTCTGTCCCCTTTTGGGGCTAGTTAGATTCAGCGTTATG11.3157894736842104No Hit
GTTAGTAAGATTGCACTTGAGTCTATCAACGGTGGCACACGAACTCTCGA11.3157894736842104No Hit
CTATTCCACCATGTTACGGCCAGAGGTGATACCATCACTCGGTCTGATCC11.3157894736842104No Hit
ATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACAC11.3157894736842104No Hit
CTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTTCTACTCTTGCCT11.3157894736842104No Hit
GACTTACAGTTCTTGGAAAGGATGCAGGTGCATTGACTGAAGATCCAGAT11.3157894736842104No Hit
GTGGCCGGTCTTAGCCTGGGGTGGGGGGGGCCGGGTGGGGGTGGGGTGCG11.3157894736842104No Hit
ATGCTGGGCCATATCTCTTGTCTTATTTGACCAAAATGAGAAATCCTCTC11.3157894736842104No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTACCGTTTTCGATACCTTACCAA11.3157894736842104No Hit
GAATAGGAATGGCCCAACAACAAGTACAGTTCATTACCTGTCTCTTATAA11.3157894736842104No Hit
GTGCAGCCTTTCTGTACAATGAATAGCTCAAGAACTCGTTCCTCGCCGAA11.3157894736842104No Hit
ACTGTGGACCATAAGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA11.3157894736842104No Hit
GCCGGGTTGTGTGGCCTGGGGGCGGGGGGGGCGGGGGGCGGGGGTGGTGG11.3157894736842104No Hit
GTATGCTAGTGTCGCGGGTTCGTTTCATTCACAACGCTACGTCCCCTGGC11.3157894736842104No Hit
CTAGAAAAAAAAAACACAGACAGACATCGACCAAAAGAAAAATGATTGAC11.3157894736842104No Hit
ATCCTAGATTCCCGTTTTCCTTTCATTACCAAAACTACCAACACAACACC11.3157894736842104No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG11.3157894736842104No Hit
CTAGAAACAAGGACGTTTTTAAACTATTCAACAACTAATACATGTCCATC11.3157894736842104No Hit
CCTTTTGCAAGATTGATCAGTTCATTGATGCTTAATGCTGGGCCATATCT11.3157894736842104No Hit
ACTAAGTGATGGCCATCCGACTTCTGTTGGTCGCTGTCTGGCAGGCCGTA11.3157894736842104No Hit
TTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCAAAACAAACGAT11.3157894736842104No Hit
CACAAAGACCACTCTGGACAAAAAGGCCATAATAAAAAACTACACATCAG11.3157894736842104No Hit
GCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATC11.3157894736842104No Hit
GGCAATGAGATACCCAATTACAGCAGACAAGAGAATCTGTCTCTTATACA11.3157894736842104No Hit
AGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGACTGTCTCTTATA11.3157894736842104No Hit
CAATCAGTACCATTCACTCAATATCAACAACAAGGAACAACACGCGTGGA11.3157894736842104No Hit
AGGCAAACCAAAACAAATCATCGAAATACGACTCTAATTTACATAAAAAA11.3157894736842104No Hit
GAAAGGATGCAGGTGCATTGACTGAAGATCCAGATGAAGGCACATCTGGG11.3157894736842104No Hit
GTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCAT11.3157894736842104No Hit
TGCCCAATTAGCACATTACCGGTCTCGCCTTGAGCGAGATGGCTCTGGGA11.3157894736842104No Hit
GAATAGGAATGGCCCAACAACAAGTACAGTTCATTACCCTAAGGCTGTCT11.3157894736842104No Hit
CTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATAT11.3157894736842104No Hit
AATTAGCACATTAGCGTTCCCTCCTTTTGCAAGATTGCTCAGTTCATTGA11.3157894736842104No Hit
GCACCACAATCACTAATACTGTCCATCCACAATACAGACATACAAAATAA11.3157894736842104No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)