FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_H4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_H4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCACAGACAGATGGCTACTACCACCAATCCACTAATCAGGCATGAAAAC14.761904761904762No Hit
GGCCAAGGGTGTTGCCTCTTCCTTTTAAGGACTTTTGATCTCGGCGGAGC14.761904761904762No Hit
GGGCGGGCGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14.761904761904762No Hit
AGATTGCTCAGTTCATTGATGCTTAATGCTGGGCCATATCTCTTGTCTTC14.761904761904762No Hit
GGTTCATGCTCATGCCTAGGCAAAAGATAATAGGCCCTCTTTGCGTGCGA14.761904761904762No Hit
TCCTTGGCCCCATGGAACGTTATTTCTCTTTTGAGCTTCTTGTATAGTTT14.761904761904762No Hit
TCTCAGGACAGCAGACTCCACCCCAGATGTGACTTCATCTGGATCTTCAG14.761904761904762No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG14.761904761904762No Hit
CTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATCTCTCAGTT14.761904761904762No Hit
CATCTGTACCTACTTCGCGCTACCTTTCTGACATGACCCTCGAGGAAATG14.761904761904762No Hit
GAGTAGGACGCCGCGGGGAGACGGTCGTGGGTGGTGCCAGGGGGGGGGGC14.761904761904762No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC14.761904761904762No Hit
GCTAGAGTCCCGTTTTCGTTTCATTACCAACACTATGTCCTGTCTCTTAT14.761904761904762No Hit
TACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCCT14.761904761904762No Hit
GAGGCCATGGAGGTTGCTAATCAGACTAGGCAGATGGTACATGCAATGAG14.761904761904762No Hit
GATCCATTCCACGATTTGTTTCCCAACAAGAGTGGCTGTTTCGATATCGA14.761904761904762No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAA14.761904761904762No Hit
CATGATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCTGTCTCT14.761904761904762No Hit
GAGATAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAAGGCTAA14.761904761904762No Hit
GAATGGTAACACGGTTCGAGTCTCTGAAAATATACAGAGACTGTCTCTTA14.761904761904762No Hit
CCATAGCCTTTGCCGTAGTGCTAGCCAGCACCATTCTGTTTTCATGCCTG14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)