FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_H2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_H2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47
Sequences flagged as poor quality0
Sequence length151
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAACAAGGGAACGCTATCCAGCAGTTAACAAAAAGAGGGAAAAGAAGACC12.127659574468085No Hit
CTTATCTGCTGTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGA12.127659574468085No Hit
ACCAATTAGCACATTAGCCTTCTCTCCTTTTGCAAGATTGCTCAGTTCCT12.127659574468085No Hit
GCTCTGGAGGTAGTGAAGGTCTCCCATTATCATCACAGTTTCTCCAATCG12.127659574468085No Hit
CTGGGGGGCGGGCAGGAAGTATGGTCGAGGCGCGGGGTCGGGTCGTGTCC12.127659574468085No Hit
GGTGCACGATCCCAATGATATGTGCTGCAGTGACGAGTGGATCACTTGAT12.127659574468085No Hit
GAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGA12.127659574468085No Hit
CTCGGGAGATGGCCCAGCTGGGAGCGGGGGGGTCGGGGGCGCGGTGGGGT12.127659574468085No Hit
ACCTGGAACCTTCGATCTTGGGGGGCTATATGAAGCAATCGAGGAGTGCC12.127659574468085No Hit
CCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCAT12.127659574468085No Hit
GACACTACTTTTCCTAAAAATACCAGCGCAAAATGCCATAAGCACCAAAT12.127659574468085No Hit
CAACAAGGCAACCAAACGACTTACAGTTCTTGGAAAGGATGCAGGTGCAT12.127659574468085No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC12.127659574468085No Hit
GGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGC12.127659574468085No Hit
GCTGTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGG12.127659574468085No Hit
GTTAGACCTCTGACTTATGCTCAGGTCATGATCATGCTGAGGTCTCTTAA12.127659574468085No Hit
CACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTT12.127659574468085No Hit
ACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGA12.127659574468085No Hit
CACACACACACACACACACACACACACACACACACACACACACCTGTCTC12.127659574468085No Hit
CGATTCGGGTGGCGGAGACCACGGGAAGGAAGGGATGTTGGTTCAACCAC12.127659574468085No Hit
TAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCT12.127659574468085No Hit
ACTTTGGACCATATGGCCATAATCAAAAAGTACAAATCAGGAAGGCAAGA12.127659574468085No Hit
AAAGCAGGGGATTAGGAGTACACTTTCTGTGAGAAGCTCTGAGTAACCTG12.127659574468085No Hit
GAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCTGTCTC12.127659574468085No Hit
CATTGATGCTTAATGCTGGGCCATATCTCTTGCCTTCCTGATGTGTACTT12.127659574468085No Hit
ACTCTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCCTGTC12.127659574468085No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA12.127659574468085No Hit
CATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGACG12.127659574468085No Hit
CCATAACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGTATGT12.127659574468085No Hit
CCATTCCTAATCCACCATATAACGTCAAGAGGTCATACCCTCACTCGGTC12.127659574468085No Hit
GTTTAGCACAGCACCAGAATTTATAATCCAACTGTGGGAAAAGAGAAGGG12.127659574468085No Hit
GTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATCTGTC12.127659574468085No Hit
CATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAA12.127659574468085No Hit
CTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTG12.127659574468085No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT12.127659574468085No Hit
CCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCCTGTCTCTT12.127659574468085No Hit
ATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCAAAACAAACGA12.127659574468085No Hit
AGTCTGGACGGATCAAGAAAGAAGAGTTCTCTGAGATCATGAAGATCTGT12.127659574468085No Hit
GCTCTGGAGGTAGTGAAGGTCTCCCATTCTCATCACAGTTTCTCCAAGCG12.127659574468085No Hit
ATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACACCATG12.127659574468085No Hit
GTGAATCAGCAATCTGTTCACAAGTGGCACACACTAGACCCAAAGCAGCG12.127659574468085No Hit
CAAGAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAA12.127659574468085No Hit
GAGCAAAAGCAGGCAAACCATTTGAATGGATGTCAATCCCTGTCTCTTAT12.127659574468085No Hit
GGGCCAGGTGGCTGGTTCGGGGGTAGAGGCAGGGGGGGGGGGGGCGGGGG12.127659574468085No Hit
CTACGTCCCCTTGCCCAATTAGCACATTAGCTGTCTCTTATACACATCTG12.127659574468085No Hit
GAACAGGAACAGGATACACCATGGACACAGTCACCAGCACCTGTCGCTTA12.127659574468085No Hit
GGAACGTGGTGCTTAAGGCATGTTGCGCTGGAATTTTTAGTAAAAGTATA12.127659574468085No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)