FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_H1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_H1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54
Sequences flagged as poor quality0
Sequence length151
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT23.7037037037037033No Hit
GTATTGTGGACCTCTAGGTCGACAGCCCTGAAGCTATTTTAAAAGGTGCA11.8518518518518516No Hit
ACTGAGAGAGCTACTGTCGCAGTCCCGCTCTCGCGAGCTCCTCTCTCAGT11.8518518518518516No Hit
GTCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGACCTGTCTCTTA11.8518518518518516No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCCTGT11.8518518518518516No Hit
CGATTCCACCATGTTACGGCCAGAGGAGATACCATCACGCGGTCTGATCC11.8518518518518516No Hit
GGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACCTGTC11.8518518518518516No Hit
ATCCAGACCTGAGTCAAAGGCAGATGCTTAACCCACTGCTGTCTCTTATA11.8518518518518516No Hit
AATAATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAA11.8518518518518516No Hit
TAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTC11.8518518518518516No Hit
AACGTACTCGTCAGGCAGGCTAGAGATATGGCCCTGCGGTAAGCTTCAAT11.8518518518518516No Hit
GCTATAACCCTAGTTCTTAACACTATACCTTGCACATAGTAGGCTGTCTC11.8518518518518516No Hit
CTCTTTTACATCACTATTGTCTCTTGTAAAGGGTGTGCAAATTCCTTCTT11.8518518518518516No Hit
CTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCT11.8518518518518516No Hit
GTCTGATAGAGTACCGTTTTCGTTTCAATAACAACACTACGTCCCCTTGC11.8518518518518516No Hit
GAAACAAGGGAACGCTATCCAGCAGTTAACAAAAAGAGGGAAAAGAAGAC11.8518518518518516No Hit
ACATTAGCTTTCTATCCTATTGCAAGATTGCTCAGTTCATTGATGCTTAA11.8518518518518516No Hit
ACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTATCTACTTTTGCA11.8518518518518516No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.8518518518518516No Hit
CACCCACACACACACAAAAACACACAAAAACACACAAACCAACACACACA11.8518518518518516No Hit
GAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGGCCCAGCAT11.8518518518518516No Hit
ACAATGCATAATGACATATAGTAAGAACTGGACAGACAGGTTCTCTGAAC11.8518518518518516No Hit
TCAGGGGGCGGGGCCGGCGTGGCCGGGGCGGGAGCGCTCGTGGGCGCCGT11.8518518518518516No Hit
GGCGCGGGGCGCGGGGTCGGGGCGGGGGGGGGGCGGCGGGGCGGTGGGGG11.8518518518518516No Hit
GTCCTGGGATAGAGCCCTGCATCAGGCTCCCTGCTCAGCGGGGAGCCTGC11.8518518518518516No Hit
CTATGGGATACCCAATTACTGCGGGCGGGAGCGGGCGGGACCGGATGCCA11.8518518518518516No Hit
TGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTC11.8518518518518516No Hit
ACGAGAAACAAACAAATACCACTGTCCACCATAAATACCAGAAAAAAGCA11.8518518518518516No Hit
GGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTAC11.8518518518518516No Hit
ATGCTGGAGGGCGGTGTAGGGGTCCGGGGGGGCGGGGCGTGGGCTGGGCC11.8518518518518516No Hit
GTGGGGGGGGGGGCGGCGCGGGCGCGGGGGCTGGGCCGCGCGGCCGGGCG11.8518518518518516No Hit
GGGGTGCACCAGTCTCTGGTTTTGTCGTCCACGTTCCCTTTTCTGAGTAT11.8518518518518516No Hit
GTATCACATTGCCATCATCAAATTCATTCTGAGTGCTGGCTTCTTCTCTT11.8518518518518516No Hit
CAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGA11.8518518518518516No Hit
AATGCACACCAAATCCTCAAAAATCAACTCCTGCATGGCTGAATGACCCT11.8518518518518516No Hit
ACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGCTGTCT11.8518518518518516No Hit
CTCTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACC11.8518518518518516No Hit
ATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACTGTCTCATATAC11.8518518518518516No Hit
GGGGGCCGGCGGCCGGCGGGGGCGGGACCCCGCCCCCCCCGCCGGGGCCC11.8518518518518516No Hit
CCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTC11.8518518518518516No Hit
CTCATACATATGGTAAATGTTCCATTCCCAGCCAAATGATTTGTGTACTG11.8518518518518516No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA11.8518518518518516No Hit
CAACAAGGACAAACCCTCTGGATCAAAACAAACGATGCTTGATCAGACCG11.8518518518518516No Hit
CTTGTGAAAGGAAGGTCACCTATGGGAGGAGTAGGAGAAGCAAATGATCT11.8518518518518516No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG11.8518518518518516No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA11.8518518518518516No Hit
CTTCCTAAGGTATTTTTGCATAATGAGGGACTGCTTCCTGGCTTACTCAG11.8518518518518516No Hit
GATTTCTCATTTTGGGCAAAGAAGACAAGAGACTGTCTCTTATACACATC11.8518518518518516No Hit
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGCTGTCTCT11.8518518518518516No Hit
ACTAACCCTTACAAAATTATAAAAATAAAATAATAACAATTTCAAATATA11.8518518518518516No Hit
GTTCTTGGAAAGGATGCAGGTGCATTGACTGAAGATCCAGATGAAGGCAC11.8518518518518516No Hit
ACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTT11.8518518518518516No Hit
CCCCACCAGATGTGCCTGCCTCTGGAGCTTCAGTCCATGCAGCTGCATCC11.8518518518518516No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)