FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_G6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_G6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATGTAGACTAGTTGTAATTGAACAATTCATAATACAACATGTCACTG12.0No Hit
GTACAATCATCTCTGAAATCAAGAACATTAATGTAATGTAATAACTAATT12.0No Hit
AGGAGAAAAAATCAATCGTTATGATACAGCAAACTTTTTTATGCTCAAGA12.0No Hit
GATCCACAGTGGTCATAGAGAGAAACAAGCCAGAGCGGCACTGCGACATT12.0No Hit
AAACAAAGGAATATAAAACTAATATCTAAATGTAAGAAAGCACAAATTAA12.0No Hit
AATCTAAACTCGAAATCCCGACCTACAGATATAATCTCACACAACACTGT12.0No Hit
GAATTAAGCTTCATAGAAATTACACATATACCCAAACTCTTATACACAAA12.0No Hit
GATCCAGCATAGTTTGTTTTGCTCCAGAGGGATTGTCCTTGTTCATTCCA12.0No Hit
CAAATACAACAAAAAAGACAATAATAAACAATAATAAACAGATGAATCAA12.0No Hit
CCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGCTGT12.0No Hit
AAAAATGGACAAAAACAAAAAGAACAAATACAAAAACAAATAAAAAAACA12.0No Hit
GTACTATATTATGCTAAAAAAATATTACAACATGATACGTAAACAGATCA12.0No Hit
CTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTG12.0No Hit
GAAAAATATAGAAAAGAACATTTATACATAATCCACATAAATATAATATA12.0No Hit
GTCCCGAGAGGATTTCTCATTTTGGGCAAAGAAGTCAAGAGATATGGCCC12.0No Hit
TTTCAAAAATCAACAAAATGCACAAAATAAAAATAATCAGACAAATATAC12.0No Hit
GACAAACACTTCTTGCAAAGGAAGAAGTACCATTGAAATTATAACCACAT12.0No Hit
GTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGACCT12.0No Hit
CTGCGTGGGCCACGGGTTGGCTTGGTCCCTGTCATGGGTTGAATTGTATC12.0No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTGCGTTTGATTACCAACACTTCGT12.0No Hit
CTCCAGACCATCCCTAATAACACATTTTACCAAATGACCATAATAAAAAA12.0No Hit
TACAAAAACTCTTAATTATGCATAATACATATTTATCCAACAGAAGGTTT12.0No Hit
ACAAAATAAGACCACTATTCACCATAACTCAAAAAAAAAAAAATAAACAT12.0No Hit
AAAAAATTAATAATATAAAATAAACGAAAAATAAAAGAAAGCAAAAAGAA12.0No Hit
GGCAAGATATAATACCCATCATAAACCAACAAGATTCTATAATACACATA12.0No Hit
TTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAG12.0No Hit
GTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGT12.0No Hit
CAGTCTGGAAATCACAAATAATTGTAGTTTCCCCATTACTATTCAAACAC12.0No Hit
CCCCAGATGTGCCTTCATCTGGATCTTCAGTCAATGCACCTGCATCCTTT12.0No Hit
CAATAGCGTGCTCTCCTTATGCAAGATAACAACGGTCAAAGATGATAATT12.0No Hit
ATTATAAACAATTCGACAACTAAATTATTGCAATAAGAAAACTTTTTCAC12.0No Hit
CTTAAAATCAAGAAGAACGCAAAACATTGAAAGAGACAGATAAAATGATA12.0No Hit
ATACACAACTATGCACAAAAAGAGAAATACTCTAAGGAAAGAAGACTAAA12.0No Hit
AAACATATACAAAAATGTTACGGCCAGAGGTTATACCATAACAAGCTCTC12.0No Hit
GCAATGAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGATTCC12.0No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAA12.0No Hit
GGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAATATGG12.0No Hit
ATAACCCCAAAAATTCACAGCCAGAAGCATTCTTTTCCTACATCAAACCA12.0No Hit
CAACAAAGCAGCAAGAAAATAGAACAAACCCGAAATAAGAAATAAGTGTA12.0No Hit
AAGTATGCTATAGTCACGTAATAGTTTCATAAAAAAAAAAACGAACCCTT12.0No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA12.0No Hit
ATTAACTTCTATAAAAGACATAACTCTACCACAATCTTAGGTAAATACTT12.0No Hit
ATTGCCACAATACCGGTCTCTCCATATGCAAGATTCCTCATTTCAGAGAT12.0No Hit
GGACGTTGTTAAAAGAATAGACAACAAAATGATGACACACCGAATTATTA12.0No Hit
GTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGA12.0No Hit
CTTCCTTCATAAAAACAAACAAGACAATTATTCAAATGTCTTATTTAATA12.0No Hit
CTCCAGTATTCAAGAAAAACAATCAAACCAAACCACAAACAGTTCTTGTA12.0No Hit
CCCAAAGAGGAATAAAGTCCCATGGTCTGCAGAGTAAGTGAGAATTATTT12.0No Hit
GGGGGGCGCCCGCCCGCCCCCCCCCCCCCGCGCCCCCCCCCGCCCCCCCC12.0No Hit
GAAATAAGCATCAATAAACAGACCAATCATCAAAAAGCAGAGCACGCTCA12.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)