FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_G2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_G2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTGGGAGATGTGGGGCGAATGGCATTGGGGACGTGGGGGGGGCCCGTG11.8867924528301887No Hit
GATCTAATGTCGCAGTCCAGAACTCGTGAGACAATCAAAAAGCTGTCTCT11.8867924528301887No Hit
ATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAAT11.8867924528301887No Hit
GATACCATCACTCGGTCTGATCCAGCATCGTTTGCTTTGCTCCAGAGGGT11.8867924528301887No Hit
GCGTAATCAACTTTTGCAAGAATGCTCAGTTCATTGATGATTAAAGCCAG11.8867924528301887No Hit
CTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCTGTCTCT11.8867924528301887No Hit
GAGAAACTGTGATTATAATTGTCTTACTGAAATTCATAGAGAGAATAAAA11.8867924528301887No Hit
ATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACT11.8867924528301887No Hit
GCCAGAGGTGATACCATCACTCGGTCTGATCCAGCATCTGTCTCTTATAC11.8867924528301887No Hit
CATACACAGTCACTCAATAAATCTGGACAACAACATTACATCGCAAATAA11.8867924528301887No Hit
ACACATAAAAATATCTACAAAAACAAAAATTTCAAAAAAATAACCAACAA11.8867924528301887No Hit
GAAAAAATATGAAAATCAAAATTAGAAACCCAATAAAAACAGACAATATA11.8867924528301887No Hit
AAAACAGACAAAGAAACACCATCCAAACCAATAACACTAACACTGTAGGT11.8867924528301887No Hit
GGTAATGAACTTTACTTCTTGTTGGGCAATTCATAATCCAAAATGTAACG11.8867924528301887No Hit
CACAATGTAGAGTATCAAAGAAATGAGATAACAAATTACACAATACAACA11.8867924528301887No Hit
CACTAAGACCACTGTGGACCAAATGGCCATAAACAAAAAGTACAAATCAT11.8867924528301887No Hit
CAATTACAGCAGACAAGAGAATAATATGGCCCAGCATTAAGCCTGTCTCT11.8867924528301887No Hit
TTCCAGAGAGGAATGAACAAGGACAAACACTCTGGAGCAAAACAAACGAT11.8867924528301887No Hit
CTGTCTGGCTGTCAGTAAGTATGCAAGAGTCCCGTTTTCGTTTCATTACC11.8867924528301887No Hit
TAACATATTATCTCAATGTTCAAACAATCTTTAGCCCGTGTCAGATAGAC11.8867924528301887No Hit
AAACAAGTAATTTTATAAACTATTAGACAAAAAATTTATGGCCATCCCAA11.8867924528301887No Hit
CTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGA11.8867924528301887No Hit
CAGTAGCAAACAATGAACAAACAGATCAATACACATCTCTCCATTTCAAA11.8867924528301887No Hit
GGTGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTAGTGCT11.8867924528301887No Hit
AATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTA11.8867924528301887No Hit
CGACATATTATGCTCTTGTCTCATCGACTTGGGAATCTAATAGCCTACAA11.8867924528301887No Hit
ATCTAAATACTCACTAACACAAAAGAGAGAAAAACACAAAGACAAAAATA11.8867924528301887No Hit
AAACAATTGCAATTCTAAATAATTAACCAGTTACGATCATCACGACATCA11.8867924528301887No Hit
CAACTACTCTAATTTGCTCGCATTACAACATGTAACTTAATAATACATCA11.8867924528301887No Hit
CACACACACACACACACACACACACACACACCTGTCTCTTATACACATCT11.8867924528301887No Hit
CCTCTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGCAATTGGGTATC11.8867924528301887No Hit
GAGATATGGACCATCAATAAGCATCAAATAAAAGAGCAATCTTGAAAAAC11.8867924528301887No Hit
ACATATGTCCAAAAATAAATAATCAAAAAAAACACCAATCTAGCTAAAGA11.8867924528301887No Hit
GAAAAAAAAAGGTCTTTATTAAAATATTAGACAACTAAATTATGCACATA11.8867924528301887No Hit
ATTATAGAATCACTAAAAATATAAAAAAACAAAAAAAAATCCCATATCAC11.8867924528301887No Hit
ATACACTACATACTGATGGGCTCGATATAAAATGACATTAAATAAAAGAA11.8867924528301887No Hit
CATAAAAAACAATCAAACTGCCACATCTGAAACAATAACTCGGTCTAATC11.8867924528301887No Hit
GAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGCTTCCAGAGC11.8867924528301887No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC11.8867924528301887No Hit
CCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGT11.8867924528301887No Hit
GGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTC11.8867924528301887No Hit
GAACCAGAAAAGATATAAATCATCAAAAGCGAATGAACTTGTACAATCCT11.8867924528301887No Hit
TTACCGTTCTCTCCATTTGAAAGATTGCTCAGTTCATTTATGCTTAATGC11.8867924528301887No Hit
TCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTCCTGTC11.8867924528301887No Hit
TACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTT11.8867924528301887No Hit
TGAGATAACAAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGAG11.8867924528301887No Hit
GCTCCAGAGGGTTTGTCCTTGTTCATTCCTCTCTGGAATCATGTCCATTA11.8867924528301887No Hit
TTGCACAGTCCATTGATTCTTAATGCTGGGCCATATCTCTTGTCTTCTTT11.8867924528301887No Hit
AGGCAACCAAACGACTTACAGTTCTTGGAAAGGATGCAGGTGCATTGACT11.8867924528301887No Hit
ATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGAT11.8867924528301887No Hit
GTAGCGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGACAG11.8867924528301887No Hit
TGCCACTTAGTGTTAGTCAATAAACAACAACGCGAATCAAAACAACTTAA11.8867924528301887No Hit
GAGCTGAGTTAGGAGGCAATTACAATAACCCAGGCATGAGAAGATGGTAT11.8867924528301887No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)