FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_G10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_G10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTATAACTCTTGTCAACTTACCACAACATAAAACAAAATATAAGAAACA12.4390243902439024No Hit
CATTAAAGCATGACATGGTTTTGAAGTCCAATATTATAAAGTAACACTAC12.4390243902439024No Hit
CCCTTGCCCAATTAGCACATTATCGTTCTCTCCTTTTGAAAGATTGCTCA12.4390243902439024No Hit
CCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTCAGGACAGC12.4390243902439024No Hit
CAATTACAGCAGACAAGAGAATAATGGACATGATTCCTGTCTCTTATACA12.4390243902439024No Hit
GAAAAAAAGAACAAAAAAAAAAAAAAATCATTTCAATCAAACTCTACAAA12.4390243902439024No Hit
CTAAAAAACAATAAAACCGTAACAGATAGAAAGATACAGATAAAATATAC12.4390243902439024No Hit
CTTAAAATGAAGATGAAAAACCATTCGCAACTATAACCAAACAGCAACTC12.4390243902439024No Hit
ACTAAGGGCTTTCACAGAGGAGGGAGCAAAAGTTGGAGAAATATCACAAT12.4390243902439024No Hit
TATGTGCCTTCATCTGTATCTACATTCAATGAAACTCCATCCATACAAAA12.4390243902439024No Hit
TTTGGGAAAGCTTGCCCTCAATGCAGCCGTTCGGCTCGAATCCATCTACA12.4390243902439024No Hit
GTCCCAATTGCTCTCGCCACTTTTCATTTCTGCTCTGGAGGTAGTGAAGG12.4390243902439024No Hit
AACTATTAATCCCTGATTAATGATAACTGGATTTTGCTTAAACAATCTAG12.4390243902439024No Hit
GTTCACAAGTGGCACACAATAGACCAAAAGCAGCTTCTGTGTTCACTGTT12.4390243902439024No Hit
GTCTGATCCAGCAGCTTTTGTTTTGCTCCATAGGGTTTTAACTTGTTCAT12.4390243902439024No Hit
CTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACTATTGCTCCCTCCTCC12.4390243902439024No Hit
CAAACAACTGACATCGAACAACAATTACAAATGAATCACTTTATATACAA12.4390243902439024No Hit
GAATGAACCAGTCTCGTGACATTTCCTCGAGGGTAATGTCAGAAAGGTAG12.4390243902439024No Hit
CAAATCAAACACAAAATTCTGACACCGGAGTTCTACTCTAGCATTCCAGA12.4390243902439024No Hit
AACAATATGAAACTAAAAAAAACCCAAAAAACTAAAAATAAAAAATAAAG12.4390243902439024No Hit
GAACTCACACAAAAATAAAAAACACGAACACATACAATTAACATACTCCT12.4390243902439024No Hit
CTTGTTGGGAAACAAATCGTGGAATGGATCTTGAAAGAGGAATCCAGCGA12.4390243902439024No Hit
AATAACAACCCAGAACTCATAAAAAACACCATGAATTCAAAGAAAAACAA12.4390243902439024No Hit
CCATCTTTTCGTTCAATTGGACAATGCGATCATGAAAAACAACAAATTAA12.4390243902439024No Hit
GGCAATGAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGATTC12.4390243902439024No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA12.4390243902439024No Hit
CGCAAAGAGGGCCTATTATCTTTTGCCTAGGCATGAGCATGAACCAGTCT12.4390243902439024No Hit
CACCAATAAAATGAATCAATACATTTACAACAGTTAAAACTCAATAATTC12.4390243902439024No Hit
GGATAAATCCTAACTAAAGTTCTGCAAACAAAAATAACATTCATGAAAAT12.4390243902439024No Hit
GGCCTCATATACAACAGGATGGGAACAGTGACCACAGAAGCTGCTTTTGG12.4390243902439024No Hit
ATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTCTTGC12.4390243902439024No Hit
CCATTTGAATGGATGTCAAACAGACTCTACTTTACATAAAAATTCAAGCG12.4390243902439024No Hit
GATTAGAGGTTTCGTATACTTTGTTGAAACTTTAGCTAGGAGCATTTGCG12.4390243902439024No Hit
CAATTACATCAGACAAGAGAATAATAAGGACCAGCATTAACAATCAATGA12.4390243902439024No Hit
TATAAAAAAAGAATACTCATGGAAAACAAAAATATGTCTAAAAGTTAAAA12.4390243902439024No Hit
ATCATCAGGTAGTGGACCATCAATCCGGTTGAGCTGGGGTGCAACAGTCT12.4390243902439024No Hit
CTCTAGAACACAGTCTGTTTGTGCATACCCACTTGGTTCATTATCCTCAG12.4390243902439024No Hit
AATTACAACAAGGCAACCAAACGACTTACAGTTCTTGGAAAGGATGCAGG12.4390243902439024No Hit
CTCACATTCACAGTCAATGAGGAAAATTGCATCCTACTCCTGTCTCTTAT12.4390243902439024No Hit
CAAAAATAATGAAAAAAAATACACAATAACACATACCTTCAAAATCACAA12.4390243902439024No Hit
GAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAA12.4390243902439024No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)