FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_F9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_F9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTT111.11111111111111No Hit
ACGTTGATCATAGAAATTATATACCCAATTACAGAATACAACATAATAAA111.11111111111111No Hit
TTTCATTACCAACACTACGTCCCCTTGCCCAATTAGCACACTGTCTCTTA111.11111111111111No Hit
GTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGA111.11111111111111No Hit
TTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTGGGCCATATCTCTGT111.11111111111111No Hit
TTTTCGTTTCATTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAG111.11111111111111No Hit
CAAGAACTGTAAGTCGTTTGGTTGCCTTGTTGTAATTGAATACTGGAGCT111.11111111111111No Hit
TCAAAGAAAAAACCAATAAAAACATAAAATAAAATAATACACATAATTCA111.11111111111111No Hit
GAAGATTAGTGGAGACAGAGAGTGGAGTAACCTACATGAACTAGTCTACC111.11111111111111No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)