FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_F8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_F8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTATTTGTTCGAAACTATTCTCTGTCGCTTTCAATCTGTGCCGCATTT218.181818181818183No Hit
TTTTTAAACAATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCG19.090909090909092No Hit
GGTGTATCCTGTTCCTGTTCCATGGCTGTATGGAGGATCTCCAGTATAAG19.090909090909092No Hit
CGAATACTGTGTCCATGGTGTATCCTGTTCCTGTTCCATGGCTGTATGGA19.090909090909092No Hit
TCCCAGGACTGTGGGATCATGACCCCGAGCAGAAGGCAGACGCCTCACCA19.090909090909092No Hit
GAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCA19.090909090909092No Hit
CTGGACGGATCAAGAAAGAAGAGTTCTCTGAGATCATGAAGATCTGTTCC19.090909090909092No Hit
AGGCGATCATGGAAAAGAACATAGTACTGAAAGCGAACTTCAGTGTAATC19.090909090909092No Hit
TTCCTGTTCCATGGCTGTATGGAGGATCTCCAGTATAAGGGAATGTGGTG19.090909090909092No Hit
ATACTCACTAAGACCACTGTGGACCATATGGCCATAATCCTGTCTCTTAT19.090909090909092No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)