FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_F10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_F10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACCATGCTAGAAATTCCAACCGGTCTCCTATATGAACTGCTAGGGAAA111.11111111111111No Hit
CCTCGAGGGTCATGTCAGAAAGGTAGCGCGAAGTAGGTACAGATGCAATT111.11111111111111No Hit
GGCCTCGATATCGAAACAGCCACTCTTGTTGGGAAACAAATCGTGGAATG111.11111111111111No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA111.11111111111111No Hit
ATTGAAGACCTCATTTTCCTGGCACGGTCAGCACTCATTCTGAGGGGATC111.11111111111111No Hit
TCTAACCGAGGTCGAAACGTACGTTCTTTCTATCATCCCGTCAGGCCCCC111.11111111111111No Hit
GTTGTCTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTA111.11111111111111No Hit
TGCAAAAGGAGAGAAGGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGT111.11111111111111No Hit
CTGTTTACTGTGTCCATGGGGTATCCTGTTCCTGTTCCCTGGCTGTATGG111.11111111111111No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)