FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGGTCGATTTTAAAATATTCGACAACTAATTCATGGCCATCCGAATTC11.8867924528301887No Hit
GTCTTAGTCAGTATCTCGCGAGTGCGGGACTGCGACATTAGATCTCTCAG11.8867924528301887No Hit
CTCTCATCAAGAATAGTAATATATCATACAGAGGAAAAGTACATCATCAT11.8867924528301887No Hit
ATCCAGCAACGTTTGTATTGCTCCAGAGCGATTGTCCTAGTTCATACCTC11.8867924528301887No Hit
GGTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATT11.8867924528301887No Hit
CTACATGTGTTTGTGAGAATGGGAGTGGAGTCCACCCTGGAAAGGAGCCA11.8867924528301887No Hit
GAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGA11.8867924528301887No Hit
ATCATATTCCAACATGATACGTCCAGATGTGATACAAACACTCGAACAGA11.8867924528301887No Hit
GAACAAAACAAACGATTCATGAAAATACAGACGGAAGATAAAAACTCAGG11.8867924528301887No Hit
CCAGAGGGTTTGTCCTTGTACAATGCTCTCTGGAAACATGTCCATATATC11.8867924528301887No Hit
AATAAAAACAAAAAAAAAACACAATTTTCTATCAACTAAGTAATAAATTA11.8867924528301887No Hit
AATCAACACAATAATGAACAATTACAAACACACACAACAACAACAAAATA11.8867924528301887No Hit
ACTAAATGATGGCCATCCCAATTCAAATGGTCGCTCACAGGCTGTCAGTA11.8867924528301887No Hit
TGACAAATTACCACATTACCGTTCTCTCATTTAGAAAGATTCATACTGAC11.8867924528301887No Hit
GTACAAAAAAAACCCAAACAGAAAGTATCAAAACGTTATACATATTACTA11.8867924528301887No Hit
GTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGG11.8867924528301887No Hit
GAGGAGCACATATATACATGTGGGGTGTGTGTGTGAGTGTGAGTGTGAGT11.8867924528301887No Hit
GATACCATCACACCATCAAAAACAGAAAAGAAAGAATACCACCACATCGA11.8867924528301887No Hit
AAAATAGGGAATCTCAATACCATCAACCACATCATACAGACTGACGCGTA11.8867924528301887No Hit
GTGAATCCACCTCCCACGAACCCAAGACCGCACACTCGCGAGCGCCCCAT11.8867924528301887No Hit
CATAAGCGTAATCAAAACTAATTGTTCATGGGCCATTACTAAACCACCAT11.8867924528301887No Hit
GTAATTGGCAAACACATAGCAATCATCCACTTAAAACTGAGCTGTCTATT11.8867924528301887No Hit
AATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGA11.8867924528301887No Hit
ATGCAGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATCATCTC11.8867924528301887No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT11.8867924528301887No Hit
GTAGTAAATACCAATTTAATAAAAAATTATAAAACTAATTGAACTCCATC11.8867924528301887No Hit
CAATTAGCACATTAGCTTACTCTACTTTTGCAAGATTGATCAGTTAATAG11.8867924528301887No Hit
CAGCCAGACAGCCACCAAAAGAATTCGGATGGCCATCAATAACTTGTCGA11.8867924528301887No Hit
GTCCTTGTTCATTCCTCTCTGGAATCATGTCCATTATTCTCTTGTCTGCT11.8867924528301887No Hit
GTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTT11.8867924528301887No Hit
GAGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTAC11.8867924528301887No Hit
TAGATATGGCCCAGCATTAAGAAAAAAAGACCTGAGCAATCTTGCAAAAG11.8867924528301887No Hit
GATCAATATACCATAATCCTAGAAACCTAAACTGCAAAATGCTCACTCAT11.8867924528301887No Hit
TTAATAAACAAAACCACAACAAAAAGAAGGCCATCCCAAAACAAAAGGAC11.8867924528301887No Hit
TAATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGG11.8867924528301887No Hit
GCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTT11.8867924528301887No Hit
GATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCATTCCT11.8867924528301887No Hit
GTGGCCCAAATGGCCAAACTCACAAAGAACACCACACGAACGCAAGAGAA11.8867924528301887No Hit
GACGTAGTGTTGGTAATCAAACGAAAACGGGACTCTAGCATACTTACTGA11.8867924528301887No Hit
ATTTATAGACATAAGAATTCTAATCGACTAACTCATCATGAAATAAAGTA11.8867924528301887No Hit
CACAATTAAAGCATACAACAGATAAGTCACAGAATTAAGCATCACACAAC11.8867924528301887No Hit
CTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAG11.8867924528301887No Hit
ATGCACCTCCATCCTTACCAAGAACACTAACTCGATAGGTTGCCTTGAAG11.8867924528301887No Hit
GTGCCCAAGTGTCTCAGTCTCGGTCTGGCCGGGGGCCAGGGGGCGCAGGG11.8867924528301887No Hit
TTTTTAAACTATTCGTCAAATAATTGATTTACATCAGAATTATTTTGGTC11.8867924528301887No Hit
ATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCATTCCTC11.8867924528301887No Hit
GCATTAATCATAAATCAAAACACACATCAATCAATACCATAAAACTCTAA11.8867924528301887No Hit
ACAACAACACGCACACACCACCACCCCAACCCACCCACCCCGCCCCCACC11.8867924528301887No Hit
CCTATCTGGAATCATGTACATTATTCTCTTGTCTGATGTAATTGGGTATC11.8867924528301887No Hit
GTCCGTTCAGTTTCCATTCAGACTAAACCTGCAAGTAGGGCACTTGCACT11.8867924528301887No Hit
GCTTCACACAAACCACCACCAACCAAACCAAGAACACAAACACGCATCCC11.8867924528301887No Hit
AACAAAGCTAGAGTCCCGTTTTCGTTTCAATAACAACACAACGTCCCCTT11.8867924528301887No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAAAGTTCTAATT11.8867924528301887No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)