FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCCCTGGGTTTTGCTTAATGCATCTTGGTTCAACTCCTTCCTCACACAT13.125No Hit
CATAAACAACAAACGAATCACTCTAAAATTACATAAACTCGAACCGTGAT13.125No Hit
TTGTCGTCCACTTTCCCTTTTCTGAGTATTGGTGTGTTCCTGTCTCTTAT13.125No Hit
CCCTTAGAAGTATCAAGGTCTCTAATCGGTTAAAGATTACACTGAAGTTC13.125No Hit
CTCATGGACTCAGGCACTCCATCCGTAGAAGGCCCTCTTTTCAAACCGTA13.125No Hit
TTAAAAAAAAATAAACACAGCAATATAGCAAAATCACAGATTACTTATAT13.125No Hit
GCCTTGCTCCAGAGGGTTTGTCCTTGTTCATTCCTCTCTGGAATCATGTC13.125No Hit
TGACATTTCCTCGAGGGTCAAGTATGAAAGGTAGAGCGACTTTGTTAGAG13.125No Hit
GCGGAAAAGGCAATGAAAGAATATGGGGAAGATCCGAAAATCGAAACTAA13.125No Hit
GTATGGATAGCACAAAGTAGCATTGACACAACTACTACATTGCATGTGTG13.125No Hit
CATTTTGGGCAAAGAAGACAAGAGATATGGCCCAGCATTAAGCATCAATG13.125No Hit
CTCCTATATGAACTGCAAGGGAAAAATTACTCGAATAGATAGCATGGTGA13.125No Hit
CATTAGATCTCTCAGTTCTTTTATTCTCTCCATATTGAACTGTCTCTTAT13.125No Hit
GCAAAAGCAGGCAAACCATTTGAATGGATGTCAATCCGACTCTACTTTTC13.125No Hit
CTAGCATACTTACTGAAAGCCAGACATCGACCAAAAGAATTCGGATGGCC13.125No Hit
TTAAATATGTAAGAAACAAAACTCTTAAGCTTTCAAACACTGACTCATAT13.125No Hit
GTAGAAACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATCC13.125No Hit
ACTGAGCACCAAAACGCCAAAAACAAAAAGAACACAACAGCAACCCAACA13.125No Hit
GCGCTGGAGGTAGTGAAGGTCTCCCATTCTCAACAAAGGTTCTCAAATCT13.125No Hit
GGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGA13.125No Hit
ATGCATCTCCACAACTTGAGGGGTTTTCGGCTTAATATAGAAAATTGATT13.125No Hit
ACTTCAATCACCCACCCCCGAACATCACAACCCTACCACCACCGCACGCT13.125No Hit
GTATGCACGACACCCCATATCGATTCAGACCCATCATCCACATCATACAC13.125No Hit
AATGTCACGAGACTGGTTCATGCTCATGCCTAGGCAAAAGATAATAGCTG13.125No Hit
CCTCCATACAGCCATGGAACAGGAACAGACCTGTCTCTTATACACATCTG13.125No Hit
CCAGGGAGCCTGCTTCCCCCTAGGCCTGATCTGCCTGCTGCCTGTCTCTT13.125No Hit
TCCTTTTAAGGACTTTTGATCTCGGCGGAGCCGATCAAGGAATGGGGCAT13.125No Hit
ACATAATGGACTCCAACACCATGTCAAGCTTTCAGGTAGACTGTTTCCCT13.125No Hit
GACAAGAGATATGGCCCAGCATTAAGCATCAATGAACCTGTCTCTTATAC13.125No Hit
TTAGCCTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGC13.125No Hit
TGTCCATGGTGTATCCTGTTCCTGTTCCATGGCTGTATGGAGGATCTCCA13.125No Hit
ACTCAGTGATGCTGTGCCATCTATTAGAAGAGGCCTTATTTTCTCAATTT13.125No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)