FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACAAACCCTCTGGAGCAAAACAAACGATGCTGGATCAGACCGAGTGATG12.3255813953488373No Hit
CATCACAAAGAAAAGAGATAAGCCCCATCCATAATCATCAAACCTCACAC12.3255813953488373No Hit
AAACAAGGTCGTTTTTAAACTATTAGACAACTAATTGATGTCCATCCGAA12.3255813953488373No Hit
CTAAGACCACAGTGGACCAAATGGCCATAATCAAAAAGTACACATCAGGA12.3255813953488373No Hit
AGATACCACAAAAAATACAACCAAAAAAATAGAAAAAAACACAACAATAA12.3255813953488373No Hit
ACTGTAAGTCGTATCGTAGCCATGTAGTAAAAGAATACAGGCTGACACAA12.3255813953488373No Hit
GGGTTTGTCCTTGTTCATTCCTCTCTGGAATCATGTCCATTATCTGTCTC12.3255813953488373No Hit
AAGATAAACTCTGACTACAAGAAAGTGGACCTATGCTTAAAAAACAAAGA12.3255813953488373No Hit
CCATAATGAAATGAAATGTACTACAATAAGTGCCAAACCTATACCAGTCT12.3255813953488373No Hit
GTTCACAAGTCTCAAAAACTAATACAAAATCACATTATGTGCAAAGAATA12.3255813953488373No Hit
AATCAAGGGCAGGTCCTACCTCATCAATCCGGAATTCCAAACATGCACCA12.3255813953488373No Hit
GGAGAGAAAAAAAGAACTCACACAACAAATCTCGCAGACCCGCACACGCG12.3255813953488373No Hit
AACGTCCTCATGCCATCCTCAACTCTACTTATAGAATATCCCCAAAACGT12.3255813953488373No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTCTGTCTCTTATA12.3255813953488373No Hit
ATTCAAGTAAAGACATAACCACTAGAACAAAGTCTATTTGTGAAAACCCA12.3255813953488373No Hit
AAATATGGATATAATAAAAGAACAGAGAGATCTAATGTCGCAGTCCCGCA12.3255813953488373No Hit
CGTTTTCGTTTCATTACCAACACTACGTCCCCTTGCCCAATTAGCACATT12.3255813953488373No Hit
AATACACAACTAAAAAAACACACTCATAAATCTATAGGACGATCTCTGGA12.3255813953488373No Hit
CAAACCATCTCTAGAAAAAAAAACTATGCTATATCATACCCATACAACGA12.3255813953488373No Hit
CCAATGAACTGGCGACAGTTGAATAGATCGCCAAAATCTGCTAAATCCTT12.3255813953488373No Hit
AGAAAGCTCTTATCTCTTGTTCTACATCAAGCAGTAGTTGTAAGTCTTGC12.3255813953488373No Hit
CTCATGTTCTACATCAAGCACAATTTGTAAGGCTTGCAAAAATGGTATAT12.3255813953488373No Hit
AGAGGCCCCAGCACGAACCATCAAGCACCGGAGCAATCCGGCCAACGGCG12.3255813953488373No Hit
GAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATG12.3255813953488373No Hit
GAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCC12.3255813953488373No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG12.3255813953488373No Hit
ACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGAC12.3255813953488373No Hit
CCTCAAATTTCTGTCCCAATTGCTCTCTCCACTTTTCATTTCCTGTCTCT12.3255813953488373No Hit
AATTGATGGCCATCCGAATTCTTTTATTCTCTCCATATTGCTGTCTCTTA12.3255813953488373No Hit
TTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTC12.3255813953488373No Hit
CACAAGATGTGCCAACAAATGGATCATAAGACAATGCACATGCATCCTTT12.3255813953488373No Hit
CCGCCTGGTGACACGTTCATTTCTGCTGTCTCGTTCCTTAAGGTCTCCTG12.3255813953488373No Hit
GTAATGCTCCAGAGGGTTAGTCCTTGTTCATTCCACACTGGAATCAAGAC12.3255813953488373No Hit
ACCCAGAGGTGCCTTGATCTCCATCATCAGTCAATGCACCAGCATCATTT12.3255813953488373No Hit
AAATAAAAAAATTGTCCAAAATTTTAAAAACGAACATTATTCTACTCTTA12.3255813953488373No Hit
ACATAAATGTACCTTGTTTAAGACAGGGTAAGCAGGCTATGTATCTGTCT12.3255813953488373No Hit
ATCAACATACTCATAAAAAAACTACATAAAAAGTCACAAAAACAAAAATA12.3255813953488373No Hit
ATAAATTTCATAAATGAAGACCTAAGTCACAAAATAAAACACACACACAA12.3255813953488373No Hit
CAATATGGAGAGAATAAAAGAATTCGGATGGCCATCAATTAGTTGTCGAA12.3255813953488373No Hit
CGTCTACCTTAGGCTTAGGTTCTGGGATCAAGTACAGCATCTGTCTCTTA12.3255813953488373No Hit
TGCACAATAAGCACATAAGCGTTAACTCCAAATCAAACATTTAAAACAAA12.3255813953488373No Hit
ATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAG12.3255813953488373No Hit
GCAGACACCACCCCAGATGTCCATAAATCTGGATCAGAATTCAATAAACA12.3255813953488373No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)