FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCAACGGGAAACCACGCACCCTGGTGAGCAAGCACCCCCATGACGCAC12.0408163265306123No Hit
ATATTATAAAGAATCATTAGTTTACCTCCAAAAGGTAAGTACTACTTCAA12.0408163265306123No Hit
CCTTAGGGACAACAACTGCACTCGTTCAGCGGCCAATCCTCAGCCACCCG12.0408163265306123No Hit
CAATGCTAGAGACCCGATAACGTTTCAATACCAACACAACGACACCTTGA12.0408163265306123No Hit
CTCTTTCCATCCTGATGTGTACATTTTGATTATGGCCATATGGTCCACAG12.0408163265306123No Hit
GAAAGCAGGGGGAGCAGCAGGCAGATCAGGCCTAGGGGGAAGCCTGTCTC12.0408163265306123No Hit
AGAGAAAAAACTACAACAAACCAGACACCAAACAACAACGACAAACACAC12.0408163265306123No Hit
GAAATTCAAGATTGGCCATTACTATTACAACATTTTACGGCCAGATCAGA12.0408163265306123No Hit
TTCCAAGAACTCTAAGTCGTTTGGTTGCCTTGTTGTAATAGAATACTGGA12.0408163265306123No Hit
ATGCTAGAGTCCCGTTTTGGTTTGCTTCGCAACGCACAGTGGTTACTGAA12.0408163265306123No Hit
CTCCATTTGCAAGATTTCACAGTACATTTATGCTTAATGCTGGGACATAT12.0408163265306123No Hit
GTTAATTGATGCTAAATGCTCGGCCATAACTCTTGCCTACATGATGTGTA12.0408163265306123No Hit
CAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCA12.0408163265306123No Hit
CATTATATCACATGTCTTCCTTGATGTCCATCATCCAGTTACCCCATTCC12.0408163265306123No Hit
GACATAAGCCCCAGAAAAAAGCAACAAACAACACACCAAACAAGCAAAAC12.0408163265306123No Hit
CTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGACCCGTTTTCG12.0408163265306123No Hit
CAAGGTACTTTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAA12.0408163265306123No Hit
ATTGCTCAGTTCATTGATGCTTAATGCTGGGCCATATCTCTTGTCTTCTT12.0408163265306123No Hit
ACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACAT12.0408163265306123No Hit
GATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGA12.0408163265306123No Hit
GAAAAAAACAAATGATACAAATAATGACGCAAACACTACCTCGCTATAAA12.0408163265306123No Hit
ATATGGCCAAGCATTAAGAATCAATGAACTGAGAAATATTGCAAAAGTAC12.0408163265306123No Hit
ATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACTTCAT12.0408163265306123No Hit
TATACCCAATTACAGAAGAAAAGAGAATAAAATGTCCCCGCATTAAGCAT12.0408163265306123No Hit
ACCCCATATTTGCCTTAATCAGGATCTTCAGTCCAAGCACATGCATCCTT12.0408163265306123No Hit
GAAAAAATAACGACCCAGAAAGCCAGACAGAAAGTATGCTAGAGACCCCT12.0408163265306123No Hit
GCGTATCTAATTGCAATCAAACAATACATTCTGAGTGATGTTTTATTCTC12.0408163265306123No Hit
GTCTGATCCAGCATAGATTGTTTTGCTCCAGAGGGTATGTCATTGTTCAT12.0408163265306123No Hit
ATAGTTTTTATTGCTCCAGCGGGTTTGGCATTGAACATTCATCTCTGGAA12.0408163265306123No Hit
AGATGTGCCTGCATCTGGATCTTCAGTCAATGCACCTGCATCCTTTCCAA12.0408163265306123No Hit
GGATCAGACCGAGTGATGGTATCACCTCTGGCAGTAACATCTGTCTCTTA12.0408163265306123No Hit
GCAATCATTTCCAGTATTCTCTTGTCAGCTGTAATAGGCTATCACAATGA12.0408163265306123No Hit
TTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTATTC12.0408163265306123No Hit
GAACATATCAATTATGATTAATGCAGGGCCATATCTCTTTACAAATATGC12.0408163265306123No Hit
ACACTGAGCACAACAGACCCCCCATGCCCTAAGGTCAACAACACTTCCCT12.0408163265306123No Hit
ATACTCACAAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACAC12.0408163265306123No Hit
CAAGCACAGTTCATTACCCTAAGGTATATAAAACTTATATAGAAAAGGTC12.0408163265306123No Hit
AAACATATCAATGATTCTAAATCCTAGTCAATATGTACAACACCTTCCAC12.0408163265306123No Hit
ATGTCAGTCCTCGTCATCATGGTGCCCTTATCATGACTCTCATTTGCATA12.0408163265306123No Hit
CCACAATGTTACGCACAGAGGAGATACCAACACTCGGTCTGATCAATCAT12.0408163265306123No Hit
CTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACCTGT12.0408163265306123No Hit
AAATAATCCTTGGACATAACTATTGTCTTCTAATCCCAAAAAGAGAAAAC12.0408163265306123No Hit
GGAAAACCCAAGAAGGCACTTCAGACTACCACAAATTAAGGAAAAAGAAG12.0408163265306123No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG12.0408163265306123No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTAAACATCAGGAAGGCAAGA12.0408163265306123No Hit
ATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACCTGTC12.0408163265306123No Hit
TAACAACTCAGACACCCATTTGTCGCTCAGGTTACTGTTCATCAATCTCC12.0408163265306123No Hit
CTAAAGTTCGCTAACTGACACTCAAAAACAATCCTAGACTCACGAATTAG12.0408163265306123No Hit
TTAACAACACAACGTCCCCTTGCCCAATAAGCACATAAGCCTTATCTCCA12.0408163265306123No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)