FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCATAGATGCATAAAGCTGGGGCATAGCGCTAGGCTACCTAGCCCAAA13.0303030303030303No Hit
CCTCTGGCCGTAACATGGTGGAATAGGACTGGCCCAACAACAAGTACAGT13.0303030303030303No Hit
CCCGGGGGGTGGGAGAGGTCGCAGTGCTGGGGGCCCCCGGCGGGGGGGGG13.0303030303030303No Hit
CCAAACATCACCCACTACAGACAAAGCACCTGCAACCAAGCCCAGAACCC13.0303030303030303No Hit
CGGTGGCCCTGGGGGACTGTGTGGTCTGGCTGGAACCCTGATGTGCAGGG13.0303030303030303No Hit
CAAACACTCTGGAGCAAAACAAACGATGCTGGATCAGACCGAGTGATGGC13.0303030303030303No Hit
GAAGTTGGTCAGGGGCCAGGCCTATACCCCCTGCTCACGGCCAGAGCTCG13.0303030303030303No Hit
CTTGTCACCTCTCACTCGCAAACTCAGTGCCCACAACCACCACACTCTCA13.0303030303030303No Hit
ACCCAAATGTGCACAGAACAAGAAAGCAAAAACAAAACATCGAGTATACA13.0303030303030303No Hit
CCTCAAATTTCATTAACAAATTCTCTCGCAAATTAACATTTATCCACATG13.0303030303030303No Hit
GGGGGGGGCGGGCCCGGGGGGGAGCTGGAGGGGGGGGGCTGTGGGGCCCT13.0303030303030303No Hit
CCTCTATTGGTGCTTCTTACATTCAGCAAGAGAAAGATGCAACTCGCAAC13.0303030303030303No Hit
GAACAGATCTTCATGATCTCAGAGAACTCTTCTTTCTTGATCCGTCCAGA13.0303030303030303No Hit
TAATGAACACGAATAAAGCAAAGAGATACACAAAAAAATAAGACAAGAAA13.0303030303030303No Hit
CACTAAGACCACAGTGGACCATAAGGCCCACCATTAAGCATCAATCAACT13.0303030303030303No Hit
CTCTTAATTAGGACAGAGAAAATTGGGTTGTTTGTCAGGTTGTCTTCATA13.0303030303030303No Hit
CATTGATGCTTAATCCTGGGCCATATCACATGAAAACTATGCCCAAAATG13.0303030303030303No Hit
GGCCTAGCTTAATCATGCGGTAGATGCGGTTGGAGTGAGTCTGGGGATCC13.0303030303030303No Hit
GACTACCATATGGCCATAATCAAAAAGTACACAACAGGAAGTCAAGAGAA13.0303030303030303No Hit
GTGGTAATGCCAGCCCATGGTCCAGCCAAAAGCATGGAATATGATGCCGT13.0303030303030303No Hit
TTGGGGAAGGGTTGGGGGGAGTGAGGGACGGTCTCTGACGGGGTGCCGGG13.0303030303030303No Hit
CCAGAGGGTTTGACCAAGTTCATTCCTCTCTGGAATCATGTCCATTATTC13.0303030303030303No Hit
GCACAAAACAGCATACTGCGTTGCTGACCCTCTTGATTTTCTAACATCCT13.0303030303030303No Hit
GTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGA13.0303030303030303No Hit
GCGCAGTGAGGAAGCCACCCTGTGAGCCAGCGGACGGAAGCTCCATGCGG13.0303030303030303No Hit
ATTCTGAGTGCGGGGTTCATCTCTTGCCTTCATGATGTGTAATTTTTGAT13.0303030303030303No Hit
ACAAAATTTTCTAAAAACTAAAAAAGATAAATGATTATACTGTCACTTAA13.0303030303030303No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCC13.0303030303030303No Hit
CACTAAGACCACTGAGCACCATAAGGCCATAATCAAAAAGAACACATCAG13.0303030303030303No Hit
GGATGTAATTTGCACTCCCATGTTCTAGCAGATATGCCTCGAATGGAAAA13.0303030303030303No Hit
GGTCGAAGGTCGCAAAAACACTCAAAATGACACTCGGGCGTTAGGAGCAA13.0303030303030303No Hit
CATATACAACAGGATGGGAACAGTGACCACAGAAGCTGCTTTTGGTCTAG13.0303030303030303No Hit
AGCTGGAACACACCCACAGAAGGAAACACCACACCCCCAAACATCCTGGA13.0303030303030303No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)