FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E4_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E4_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCCATACAGCCATGGAACAGGAACAGGATACACCATGGACCTGTCTCT16.25No Hit
TATCATGATTTGGCATTCCAACCTGAATGATGCCACATATCAGAGAACAA16.25No Hit
TTCTCCAACTATTGCTCCCTCCTCAGTGAAAGCCCTTAGTAGTATCAAGG16.25No Hit
TGGTTAGGATTTGCATCTTTCACTTGCTGAATGTAAGAAGCACCAATAGA16.25No Hit
GTCCATGGTGTATCCTGTTCCTGTTCCATGGCTGTATGGAGGATCTCCAG16.25No Hit
TTTTTAAACAATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCG16.25No Hit
TTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAACTACTTCCT16.25No Hit
CATAAGTATGTCCTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACTATT16.25No Hit
GAATCCAGCGAGACACTTAGAATGACAATTGCATCTGTACCTACTTCGCG16.25No Hit
TGGAATGGTAACACGGTTCGAGTCTCTGAAAATATACAGAGATTCGCTTG16.25No Hit
ATCTTTAACCGATTAGAGACCTTGATACTACTAAGGGCTTTCACTGAGGA16.25No Hit
ATTCAGATAAATACATGACAGAAACACAAAATACCACAAAAATTACACAA16.25No Hit
GTATATTTTCAGAGACTCGAACCGTGTTACCATTCCATTCAAGTCCTCCG16.25No Hit
GAGCAATTGGGACAGAAATTTGAGGAAATAAGGTGGTTAATTGAAGAAAT16.25No Hit
TTCTCCAAGCGAATCTCTGTATATTTTCAGAGACTCGAACCGTGTTACCA16.25No Hit
GGATACACCATGGACACAGTAAACAGAACACACCAATGACGGATCAAGAA16.25No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)