FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCTGTGTTTGTCGTCCACTTTCCCTTTTCTGAGTATTGGTGTGTTCT12.127659574468085No Hit
TACAAAATTTTACGCCAACAGGTGATACCATCACACGGTCTTATACAGCA12.127659574468085No Hit
GAGCAAAAGCAGGTCAATTATATTCAATATGGAGAGAATAAAAGAATTCG12.127659574468085No Hit
CTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGA12.127659574468085No Hit
GCAAAAGCATGCCTAGCCGCAGAGACTAACTCAACAGGGAGACCAAAGAA12.127659574468085No Hit
GGGACAGGCTGCCCCGAGCCCCCCAGGGCCCATGAGGAACTGGTGGCTTC12.127659574468085No Hit
GAATAAAAGAACTTAGATATCTAATTTCCCAGTCCCGCACTCGCGAGATA12.127659574468085No Hit
GAATAAAGGACATGATTCAAGAGAGGAAAGAACAAGGACAAACCCTCTGG12.127659574468085No Hit
GTGCAATTCTCCAGTATTCAATTACAACAAGGCAACCAAACGACTTACAG12.127659574468085No Hit
AGTATTCTGAAATTGGAAATCTCATTGCAAACATCCACAACAATCTTAGT12.127659574468085No Hit
AATCGGGATCTTCAGTCAATGCACCTGCATCCTTACCAAGAACTGTAAGT12.127659574468085No Hit
CAGGACAAAAAAAAACAAAAACCACAGAAAAAAAGAACAGACACATCAAA12.127659574468085No Hit
GAATAAAAGAATTCGGATGGCCATCAATTAGTTGTCGAATAGCTGTCTCT12.127659574468085No Hit
GCAATAATAAAAAAGTACACATCAGGAATGCAAGAGAAAAGGCCCAGCAT12.127659574468085No Hit
GATCATTGATGCTTAATGCTGGGCCATATTATTCTCTTGTCTGCTGGAAT12.127659574468085No Hit
CACCCACTCTGAACCACGATCGGTGACCGCGGGGTTCTTCGGGGTTCTTC12.127659574468085No Hit
GAGAGCCCAACGTGAGGCTCGATCCCAGGACCCTGGAATCATGACTTGAG12.127659574468085No Hit
GGGGGGGGGGAGGGGGAGGGGGCGGTAGCGGGGGGGGGGGTGTGGGGGTG12.127659574468085No Hit
CAGCGACCAAAAGAATACGGATCGCCATCAATTAGTAGACGAATAGTTAA12.127659574468085No Hit
GCCATATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCCTGTCT12.127659574468085No Hit
GCAAAGGTATGTGCTAGAAACCAGGACACCGGTTAAGGACCAGATCGGAA12.127659574468085No Hit
GTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCAT12.127659574468085No Hit
AAACAAGGTCGTATTTAAACTATTAGACAACTAAATTATGGCCATCCCAA12.127659574468085No Hit
GGAGAATAGAACATAGTACATAAATCAACCCACACAAGGACCCCAAGCCG12.127659574468085No Hit
CTCCACCCCAGATGTGCCTTCATCTGGATCTACAGTCAATGCACCTGCAT12.127659574468085No Hit
GCCAGAGTTGATACCATCACTCGGACTGATCCAGCATCGTTTGTTTTGCT12.127659574468085No Hit
CCAATGCCAAAATAGCACATTAGCGAACTCTCCATTTGCAAGATTGCTCA12.127659574468085No Hit
CGTTCACAGTCACCGGGGTAATGACATTAGATCAAGGCAGCCGCTAAACA12.127659574468085No Hit
GGGCAAAGAAGACAAGAGATATGGCCCAGCATTAAGCATCAATGAACTGA12.127659574468085No Hit
CAATATGGATAGAATAAAAGAACTGAGAGATCTAATGACGCATTCCCGCA12.127659574468085No Hit
CATGAAAACAGAATGGTGCTGGCTAGCACTACGGCAAAGGCTATGGAACA12.127659574468085No Hit
CATTAGGGTAATTAACTGTTCTTGTTTTTGTGCCATTCCTATTCCACCAT12.127659574468085No Hit
GTCTCCAGAACCCATCCACATGCCGGTTCTCTGAGTTCCACAATTTCCCC12.127659574468085No Hit
CTACGTCCCCTTGCCCAATTAGAACATTAGCGTTATATCCTTTTTCAAGA12.127659574468085No Hit
GCCCAGCATTAAGCAACTATGTGCTGATCTATCTTCGAGCAGGCGAGAAC12.127659574468085No Hit
AACTAAGAATGCTAGACTCCCGTTAACGTTACAAAACCAACACAACCTCC12.127659574468085No Hit
CATTTGACCCACACGCACAATGATGCCATCACCTTATCTACCAAATATTC12.127659574468085No Hit
CATAATCTTACAAACCTATTTCAAGAAAGATCATTTCATTAATCCATAAT12.127659574468085No Hit
CTATTAGTCTCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCG12.127659574468085No Hit
GCTGATAAAACAGATCTCACCCAGAGCCCCTGTGTGGCTCAGCAGGGTGG12.127659574468085No Hit
ATGGAGGATCTCCAGTATAAGGGAATGTGGTGCTTATGGCATTTTGCGCT12.127659574468085No Hit
CTAGTAGACACTCAAGAGCAAACCGCACATCAGAGGAAATAAAAGATGAC12.127659574468085No Hit
GGCACTGAACTAGGTCCTGAAAATAAAAGTCATATTTGATTATAAAACAG12.127659574468085No Hit
AGTAGAAACAAGGTAAAGAAAGCAACCAAGCAGAAAAAAAGTCACAGTAC12.127659574468085No Hit
CAGATGTGCCTTCATCTGGATCTTCAGTCAATGCACCTGCATCCTTTCCA12.127659574468085No Hit
GACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGA12.127659574468085No Hit
AGATGTGCCTTCATCTGGATCTTCAGTCAATGCACCTGCATCCTTTCCAA12.127659574468085No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)