FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTTAGGTTCCTTACACTAAATTGATGATCCTTTAGCATGGAAACCTT14.0No Hit
CCTTTTGCAAGAATGCTCAGTTCATTGATGCTTAATGCTGGGCCATATCT14.0No Hit
ATCAGCACAGGAGGAACGCAACAATGCATTTTATTAAGGAAATTCCAGTC14.0No Hit
CACAATTACAGCAGACAAGAGAATAAAGGACATGATTCCAGAGAGGAATG14.0No Hit
GTTCTTCTCTTGCCTTCCTGATGTGAACTTATAGATCTGTCTCTTATACA14.0No Hit
GAATAGAACCGAGTCCAGAAATCAACACACACAAGGACCGCCAGCGGATT14.0No Hit
CAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCC14.0No Hit
CAATTCAAGCAGCAAGTGTTAACGGAATATCCAGCAGCCTACTGTTAGTC14.0No Hit
CAATAATAACACAGAAGAAACTCAGACCATAAAAAAGAAATTCAAATCAC14.0No Hit
TTCCTATTCCACCATGTTACGGCCAGAGGTGATACCATCACTCGGTCTGA14.0No Hit
CGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCATTCCTCTCTGGAATC14.0No Hit
GATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGT14.0No Hit
GATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCATTCCT14.0No Hit
CTCTGATGCTGCTTTTATCTGTTTTCCGCTTTCAGCCTGCATGCAAGATT14.0No Hit
ATTCGCTTGTCTGCTGTAATAGGGTAACTCATTCCCATCATCCACTTCAT14.0No Hit
ACTAATTGATGGCCATCAGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTA14.0No Hit
CTCTTAAAGAATCCAAAAATCCAGATAACGTTACATTTCCAACACTACGT14.0No Hit
CTACATCACTAGACTTCAAGAAGTGTACTATATGAAAATTGCCAAATGCT14.0No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT14.0No Hit
CAAAAACGACACACCACAACAACACACACACCAACACACCCACACCCACC14.0No Hit
GGGACGCACAGAACCTCAAGCACCGAAACCCCCACTCAAGCCAACTGACA14.0No Hit
ATTCTCATTTTGGGCAAAGAAGACAAGAGATATGGCCCAGCATTAAGCAT14.0No Hit
CCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCAC14.0No Hit
GTCTGATCCAGCATCTTTTTTTTTGCTCCAGAGTGTTTGTCCATGTTCAT14.0No Hit
ATCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACAACGT14.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)