FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E1_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E1_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACGAGAGGATCACTTGAATCGCTGCATCTGCACTCCCATTCGCTTCTGG23.9215686274509802No Hit
GGCTATGGAACAGATGGCTGGATCGAGTGAACAGGCAGCGGAGGCCATGG11.9607843137254901No Hit
GGAGTGCAGATGCAGCGATTCAAGTGATCCTCTCGTCATTGCAGCAAATA11.9607843137254901No Hit
AACCAAAGAACATGACAAAAGAACAAAAAAGATTCAAAACGCAGTAACAC11.9607843137254901No Hit
CTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGA11.9607843137254901No Hit
GTCCATGGTGTATCCTGTTCCTGTTCCATGGCTGTATGGAGGATCTCCAG11.9607843137254901No Hit
CTGGTGCACTTGCCAGTTGCATGGGCCTCATATACAACCTGTCTCTTATA11.9607843137254901No Hit
AGGCAGGCTCCCTGCTGAGCAAAGAGCCCCAGGTGTAGGAGCTGTCTCTT11.9607843137254901No Hit
CCTTGATAAAACTAAGGGCTTACACAGAGGAGGGAGCAATAGTTGGATAA11.9607843137254901No Hit
CTTGAAAGAGGAATCCAGCGAGACACTTAGAATGACAATTGCATCTGTAC11.9607843137254901No Hit
CTACTAATCTGTTCTTTTTCCTGCCTTCACTCTTCCCTGCATCTGATCTG11.9607843137254901No Hit
CTACGAAAAAACCAATCGAACATATAAAAGAAACTATATAAAATACACCT11.9607843137254901No Hit
GCATTACCTCATCCCCAGTTTCAGTCAATAACCAACCATGTACTATCCTT11.9607843137254901No Hit
AATAGAATCACACACACAATACAGAAATACGATTCAAGTAACTCCTTTGA11.9607843137254901No Hit
TTCCATGCACGTGTTATCGCATTTGTGGTAAAATTCAAAGCAGCCGTTTC11.9607843137254901No Hit
CTTCCTCAGTGCAGGCCCACTCATCTCCATCAGGTCATCTTTTAATTCCT11.9607843137254901No Hit
GAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGA11.9607843137254901No Hit
GTAAAGACGAAGTAGGGAAGCGACATTCATTCATTTATTCAACAACTATT11.9607843137254901No Hit
AAAAAACAAAGAGAAAACAAATAAAACCAAGCAATAAAAGCCAAAATATA11.9607843137254901No Hit
AAAAATCATTGAGTGCATAATCTGTAACAGAGTCTGCCCTGCAATCCCTA11.9607843137254901No Hit
CACACGAGGGGTCCAGATTGCTTCAAATGAGAATGTGGAAACCATGGACT11.9607843137254901No Hit
TGCCTGTGTGAAGAGATGAAGCGAGATGAGGGGCGTAGGCTCCGTGACAT11.9607843137254901No Hit
GGAATGAACAAGGACAAACCCTCTGGAGCAAAACAAACGATGCTGGATCA11.9607843137254901No Hit
GTTCTCATTGCATGTACCATCTGCCTAGTCTGATTAGCAACCTCCATGGC11.9607843137254901No Hit
GAAGCAAACTTCCAAATGTGTGCATATTGCAGCAAACTTGTTAGTTTCGA11.9607843137254901No Hit
GTAGTATCAAGGTCTCTAATCGGTTAAAGATTACACTGAAGTTCGCTTTC11.9607843137254901No Hit
ATCAAAAAGTACACATCAGGAAGACAAGAGATATGGCCCAGCATTAAGCA11.9607843137254901No Hit
CATCTGTACCTACTTCGCGCTACCTTTCTGACATGACCCTCGAGGAAATG11.9607843137254901No Hit
GGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTC11.9607843137254901No Hit
GTCAAACTGACAGTCGAAAACAAAAACAACAAAATGAACAAGAACATAAA11.9607843137254901No Hit
TCGTCAACATCCACAGCACTCTGCTGTTCCTGTTGATATTCTTCCCTCAT11.9607843137254901No Hit
ACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTA11.9607843137254901No Hit
GCAAAAGCAGGCAAACCATTTGAATGGATGTCAATCCGACTCTACTTTTC11.9607843137254901No Hit
CTACAGAGGAACACTAGGATTAGTCTACAAGGTGCGCAGAGTTATAAACT11.9607843137254901No Hit
TTTTTGACATCCTCATAAGTATGTCCTGGAAGAGAAGGTAATGGTGAAAT11.9607843137254901No Hit
TCTGAGAGATCAGATATAATAAATCATTCCTGATGTGAAATAATAAATAA11.9607843137254901No Hit
GCCTGACATAGGGCTCGATCCCAGGACCCAGTGTTCATAACCCTGTCTCT11.9607843137254901No Hit
GGTTATGAGTAGAGGGTGTTTCAAGAAGGAAATTAACAAGCAGCTCCTGG11.9607843137254901No Hit
CAAAATAATAATGAAATATACAAGTTTTCGTTACATTACAAAAACACCAT11.9607843137254901No Hit
GTTAAGCATCTGCCTTCAGCTCAGGTCATGATCCCGGGGTCCTGGGACTG11.9607843137254901No Hit
TTCTAAGTGTCTCGCTGGATTCCTCTTTCAAGATCCATTCCACGATTTGT11.9607843137254901No Hit
ATTAGAAAACTAATAGATAGACAACAGAAAAAAAAACATATCTCTCTCCA11.9607843137254901No Hit
GAGACTACCAGTACCAATGAACTGGCGACAGTTGAATAGATCGCCAAAAT11.9607843137254901No Hit
GGATGATGGCAATGAAACGAAAACGGGACTCTAGCATACTTACTGACCTG11.9607843137254901No Hit
CTAAAAAAAATTACAAAATAAGCACATTACACAAAAATCCTTAACAAAAA11.9607843137254901No Hit
GTATAAGGGAATGTGGTGCTTATGGCATTTTGCGCTGGAATTTTTAGGAA11.9607843137254901No Hit
GCTTCAACAGGAGCGTGAAGAAAAGACACACACCAAACTGAGTTCAGAAG11.9607843137254901No Hit
CATTTTGAACGGTTCACCATTCCCATATAGTGAAATTTGTACAAACAGTA11.9607843137254901No Hit
ATGCCGAACTGTTGGTTCTATTGGAAAATGAAAGAACTTTGGACTACCAC11.9607843137254901No Hit
AAATAAAGACCAAGAAACGACAAAGCGATATAAAAAATAAGACAACAATA11.9607843137254901No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)