FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGACATACACACTATATCGCAAGACCGGGACCTGTCACTTATACACAT13.0303030303030303No Hit
GGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTAC13.0303030303030303No Hit
TGATAAAGTAACATTTACATTTAAAAACAAACACAAAGAACACAAGAAAA13.0303030303030303No Hit
GCACAACATGAAGGTTAAGACTGAATGGATACTGAACGGAACGGTGCTGG13.0303030303030303No Hit
AGTGAGGGTTGATTTATGGACACGGTTCTATTCCTGAATCATAAACACAA13.0303030303030303No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCCTGT13.0303030303030303No Hit
AACCACACATGACCAAAACTAGCAAAACAAACAGAACAAATCACCAAGGC13.0303030303030303No Hit
GGAACAGACCGAGAGATGTTAACACCTCAGGCCGTAACATAGATGAATAG13.0303030303030303No Hit
CTGGAAACACCTCCCGCCCCCGCCCCACCGCGCACCCTCGCGCGCGCCCG13.0303030303030303No Hit
CAACATGGCCAACGGCGCCATCATCCACCTGGCCCTCAAGGAGAGATGCG13.0303030303030303No Hit
TGAAAAATGACTGAAACAGCCAGGAGTAAAAGCAGCATACTTCTGGCACA13.0303030303030303No Hit
TCTCCCACAACGCCCGACAACCACAGTCCCCGCCCACCCCCGACACGGAG13.0303030303030303No Hit
AGTGACATTCATTTGATTCACATAAGTCAAATTTTTGCACCAAATCTACA13.0303030303030303No Hit
GAGCAGAGAGCCCGATCCGGGGCTCGATCCCGGGACCAGTCACTTATACA13.0303030303030303No Hit
ACAATAATGTATATAAAACTTATTTCGAAAAGGTCTAAAGGTTAAATTCT13.0303030303030303No Hit
ATGTAACATCTTCATATACAGATTATCAACATCCATATCCCACACACTTA13.0303030303030303No Hit
GACTTACAGTTCTTGGAAAGGATGCAGGTGCATTGACTGAAGATCCAGAT13.0303030303030303No Hit
GAAAGTAAACTCGTCAATGTCATTCTGTGTGATCTTAAGGACCTGTCTCT13.0303030303030303No Hit
CTATTCCACCATGTTACGGCCAGAGGTGATACCATCACACGGTCTGATCC13.0303030303030303No Hit
ATGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC13.0303030303030303No Hit
GGGTTTGTCCTTGTACATTCCTATCTGGAATCATGTCCATTATTCTCTTG13.0303030303030303No Hit
GAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAG13.0303030303030303No Hit
GGCCAGGTGGATGATGGCGCCGTTGGCCATGTTGTAATAAGCCAATGCTG13.0303030303030303No Hit
TTCTATCTCTAGCCCAAGATAGACTGTAGATTTACCTGTCTCTTATACAC13.0303030303030303No Hit
TAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGACTGTC13.0303030303030303No Hit
CTCTTAATTTTCTTCCTTCAGCTAAGGTCAACATCCAAGCTGCCTGTAAT13.0303030303030303No Hit
CCCAAAGTTCAGGGATCCTCATGCGCGGATTGAAACCAGGAAACCAGGAT13.0303030303030303No Hit
AGTAAGTAAGGTAGCGCGAAGTAGGTACAGATGCAATTGTCATTCTACTT13.0303030303030303No Hit
TCGAAAGCAGGTGATTAGGAGTACACTATCTGTGAGAAGCTCTGAGTAAC13.0303030303030303No Hit
CTACAACACTTTCAGTGAGAAGCACTGAGTAACAGCAGAGACACAACACT13.0303030303030303No Hit
CTAAGACCACTGTGGACCATATGGCCATAAACAAAAAGAACACATCAGGA13.0303030303030303No Hit
CAACCTGACAAACAACCCAATTTTCTCTGTCCTAATTAAGAGCTGTCTCT13.0303030303030303No Hit
ATCTAAGTTACATGAAACCAACTCACGATATAATCAATCTATACCCTTTA13.0303030303030303No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)