FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_E10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATTACAACAAGGCAAACAAACGACTTCCAGTTCTTCGAAAGGATGCAG11.639344262295082No Hit
CCTGCATCCTTTCCAAGAACTGTAAGTCGTTTGGTTGCGTTGGTGTAATT11.639344262295082No Hit
ATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAAT11.639344262295082No Hit
GCAATGGGCTGATACATCAACAAGCCAAGAAACACCTGTGGCTACCAGAA11.639344262295082No Hit
GTCTGAACCACCATCCATACAAATCCCCCACACGCAAACTCCATCAACAA11.639344262295082No Hit
TCCGATACTTTTGGTCGCTGTCTTGCTTGCAGTAAGTATGCTAGAGACCC11.639344262295082No Hit
TCTCTGGACAGGCATGGTGATTCAGACCGATGGCGTCCATGGTGGCATCC11.639344262295082No Hit
CTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTCTCTG11.639344262295082No Hit
ACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGG11.639344262295082No Hit
GAATGCTAGAGTCCCGTTTTCGTTTCATTACAAACACTACGTCACCTTGC11.639344262295082No Hit
CCAGAGGTGATACCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGCTC11.639344262295082No Hit
CTTTAGGTCGCTGTCTTGCTGTCACTAAGTAACCTAGCTGTCTCTTATAC11.639344262295082No Hit
GAACAAATCACGAAAGAAACAGAAGAACCCAGCACTCAGAATGAAGTGTA11.639344262295082No Hit
AAATACAAGAGATATGGACCAGCATTAAGCAACAATGAACTGAGCAATCT11.639344262295082No Hit
GAAACCAGGTCGTATTTAAAAGATTCGAAACCTCATTTATGGCCATCCGA11.639344262295082No Hit
GCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCA11.639344262295082No Hit
TCGAAAGCAGGCCCAGCACCAGGTCAGGGAGCCCATGACACAAGGACCCT11.639344262295082No Hit
CCATAATTATCTTGTCTGCTGGAATTGGGAATAGCATTTCCCTAAAACAC11.639344262295082No Hit
GTAAGCAGGTGAATAGACACAAAATCAAGATAAAGGCACATCTGGGTTGG11.639344262295082No Hit
GAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGAGA11.639344262295082No Hit
CAAGAGAATAATGGACATGATTCCAGAGAGGAATGAACAAGGACAAACCC11.639344262295082No Hit
GTCTGATCCAGCATCGATTGTTTTGCTCCACAGGGTTTGTCCTTGTACAT11.639344262295082No Hit
GGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGATACCATCACTCGG11.639344262295082No Hit
AAATCATGGAGAACAGTTATCATTAAATTACAAAAACACAGTCAACATAA11.639344262295082No Hit
TCAATGAACTAAGAAATCTTGCAAAAGGAGAGAACGCTAAGTTGCTAATT11.639344262295082No Hit
ATTCTAGGCTGACTCCTGGCCATTCTCTGCTTCATGCTTTACCCTCCGCA11.639344262295082No Hit
GGGTTTGTAATTTAAAATTACTATCTTGAATCAAGTCCATTAAAATCTTG11.639344262295082No Hit
TCAAAGAACTGAGCAATCATGCAAAAGGAGAGAACGCTCTGTCTCTTATA11.639344262295082No Hit
GAGAATAATGGACATGATTCCAGAGAGGAATGAACAAGGACAAACCCTCT11.639344262295082No Hit
GTAGAAACCAGGACGTTTTAAAACAATACGACAACTAAATGATGGCCAAC11.639344262295082No Hit
CATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAAT11.639344262295082No Hit
ATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACTTCAT11.639344262295082No Hit
CCATCAACCACTTCATACTGAGTGCGGGGTTCTTCTCATGCCTTCCAGAA11.639344262295082No Hit
CAATGAGATACCCAATTACAGCAGACAAGAGAATAATATTGACCAGCATT11.639344262295082No Hit
CAAAAACAACAAGGCAAACAAACGACTAAATGTTCTAGTTAAGGAAGCAG11.639344262295082No Hit
ATCCCAACCACAGGCCAGCTCCCGGGAAGGAAGGTGCAGGAGGACCCACC11.639344262295082No Hit
AGATCCAGATGAAGGCACATCTGGGGTGGAGTCTGCTGTCCTGAGAGGAT11.639344262295082No Hit
CCTCTCAGGACAGCAGACTCCACACCAGATGTGCCTACATACTGTCTCTT11.639344262295082No Hit
GATCTAATGTCGAAGTCCCGCTCTCGCGAGAGACTCACTAAGACCACTGT11.639344262295082No Hit
GAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGA11.639344262295082No Hit
GTTCACACCTTTTGCAAGAATGCTCAGTTAATTGATGCTTAAAGCTGGGC11.639344262295082No Hit
GAATGTCGCAGTCCCGCGCTCGCGGGTGACTCACTATGGCGACTGTGGGA11.639344262295082No Hit
AGGCAAATAATCGTTGGACTCATCATTCCTCAGAAGAAATATAATTAACT11.639344262295082No Hit
CCACACTACTTTGTCTAAGTCCGGGGTCCCCAGAAGCAGACCCCGAGAGG11.639344262295082No Hit
CAGTAATTTGGTAAATCATACCAAACATCCAATAAAATATGAGTTCTGGT11.639344262295082No Hit
GTTCATTGAAGCAAAAACCAGCCCCATAACTCTAGTCTTATTACAGACAC11.639344262295082No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAA11.639344262295082No Hit
CCAACATGATACGGCAAGAGGTGATACCATCACTCTGTCTGATCAAGACT11.639344262295082No Hit
TAATTATGCAAGAGACCCGTTTAATTATCAAAAACAACACAAACAACACT11.639344262295082No Hit
GCCATATAATTCTCATGTATGATGTAAGTGTGTATCTCAATGCCCTCATA11.639344262295082No Hit
ACCTTAGGGTACTGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCA11.639344262295082No Hit
GCCCAATTAGCAAATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCA11.639344262295082No Hit
CTCACTAAGACCACTGAGGACCAAATGGCCATAATCAAAAAGTACACAAA11.639344262295082No Hit
TACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACA11.639344262295082No Hit
GAAATGAGAGATCAAATGTCGCAGTACCGCACACGCGAGATACTCACTAA11.639344262295082No Hit
CCTCCATCCCAGGACCCCGGGATCATGACCTGAGCTGAAGGCTGTCTCTT11.639344262295082No Hit
CATAAGGAAGGCAAGAGACGAACCCCGCACTCAGAATGAATGGGATGATT11.639344262295082No Hit
GCGTAGGGATGGCCTGCCCTTTTGCTCTGGCGTTCCGGTGGACAGGGGAC11.639344262295082No Hit
ATCATAGAAACCTATGAACAAAGATTAAGCATTTAACACTCCAGAAGCCC11.639344262295082No Hit
CACTCGCGAGATACTCACAAAGACCACTGTGGACCAAATGGCCATAATCA11.639344262295082No Hit
GGTTTGAGGCCAAATCATGCCGTACCTTTTTATGTCATGTTAAGGACCTG11.639344262295082No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)