FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_D9_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_D9_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTGTGTGTGTGTGTTTGTGTGTGAGTGTTTTTTTTTGTGTGTGTGATT18.333333333333332No Hit
GAAAAAGAAAAGATTAGTAGATCATTTCAATATCGCTCACAGTACGAAAC18.333333333333332No Hit
GAATAGGAATGGCCCAACAACAAGTACAGTTCATTACCTGTCTCTTATAC18.333333333333332No Hit
AGTAGAAACAAGGAGGTGAATGGATGTTGACACTGTGGTAATAATGCTGT18.333333333333332No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGC18.333333333333332No Hit
ACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTA18.333333333333332No Hit
AAAACTAATAGAACTCAACCATACATAAGAAAGAACATGTCTCTCGGACA18.333333333333332No Hit
GGAGAGAACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAAT18.333333333333332No Hit
GGCTAATATCGAATTTCTCATTTATGTGAGGTAATGGCTGTCTGGAATCC18.333333333333332No Hit
TGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTC18.333333333333332No Hit
AACAAGAACCATATGAACAAAAAACTGGGATCAAGACATCTGAACAGAGA18.333333333333332No Hit
AATATAAACTGTACGGAAAAGAACTCATAAGTAAATTCATTTATGTTCAA18.333333333333332No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)