FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_D7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_D7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTCTG26.896551724137931No Hit
TATTATACAGATATTAAAACTAAAACCATGACATTAAGGAAATAATACTG13.4482758620689653No Hit
GCTCTAGTTCCATCCATGTTGTTGCAAATGGCAAGATTTCATTTCTTTTG13.4482758620689653No Hit
ATATACAAAACCATACCCACACAGACCACAGAAGCTTCTTTTGGTCTATA13.4482758620689653No Hit
ATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAAT13.4482758620689653No Hit
GGTCATTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTT13.4482758620689653No Hit
CTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGA13.4482758620689653No Hit
ATTTTTAATAATACAAATAATGAAGAAAATTACACCACATCTGTTACACA13.4482758620689653No Hit
TTTGTCCTTGTTCATTCCTCTCTGGAATCATGTCCATTATTCTCTTGTCT13.4482758620689653No Hit
AAGCAACTGAGAACACCAATTAAAGCAGACAAGAGACTCATGCACAAGAT13.4482758620689653No Hit
AGGTGGGGTGGCGGGGGGGGGGTGGCGGGTGGGGGGGGGGGGCGCCGGGG13.4482758620689653No Hit
AGTTAAATTCATTATTTTTGCCGTCTGAGTTCTTCAATGGCTGTCTCTTA13.4482758620689653No Hit
TCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATCTGTCTCT13.4482758620689653No Hit
ATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACAC13.4482758620689653No Hit
TCAACTAGTTGTCGAATAGTTTAAAAACGACCTTGTTTCCTGTCTCTTAT13.4482758620689653No Hit
GAACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGCTGTCTCTTA13.4482758620689653No Hit
GGGTTTGTCCTTGTTCATTCCTCTCTGGAATCATGTCCATTATTCTCTTG13.4482758620689653No Hit
ATGGTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACA13.4482758620689653No Hit
AAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGAACTGTCTCTTAT13.4482758620689653No Hit
TTATAAACCTTAGGGTAATGAACTGTACAAGTTGTTGGGCACTTCCCTCT13.4482758620689653No Hit
ATGCTAGAGTCCCGTTTTCGTTTCATTACCAAAACTACCTGTCTATTATA13.4482758620689653No Hit
AGTAGAAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCAT13.4482758620689653No Hit
TTATAAAAAAGTTCGTTTATAATAAAATATACAAATAATAGATCTGTCAC13.4482758620689653No Hit
GAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGA13.4482758620689653No Hit
TCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACA13.4482758620689653No Hit
ATGCTAGAGTCAAGATTTCCGATAATTACAAACACTACTGAATCTTAAAC13.4482758620689653No Hit
GTGTACTAGTGTAATTATGCGGGTGAAACCCTTTGTTAAAATTTTGGAAG13.4482758620689653No Hit
GAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCCAA13.4482758620689653No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)