FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_D5_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_D5_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAAAGTGTTCATAATCATTATCTCACTATTGCTGTAATCAGAATAAAGA14.761904761904762No Hit
GTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGG14.761904761904762No Hit
CTATAGGGATCTGATACATAGGGTCCTATTCTATGCTGACACAGATCAGA14.761904761904762No Hit
TTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACGGACAG14.761904761904762No Hit
CCTTGAGGGCCATGTAGATGATGGCGCCGATGGCAAAGTTGTAAAAAGCC14.761904761904762No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA14.761904761904762No Hit
CATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAA14.761904761904762No Hit
TAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACCTGTC14.761904761904762No Hit
ACCATACACAGGCAGATGAGTATTTACATGTGTAATCACCTTCCAGATCA14.761904761904762No Hit
GCAGACAAGAGAATAATGGACATGATTCCAGAGAGGAATGAACAAGGACA14.761904761904762No Hit
TTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTC14.761904761904762No Hit
GGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCG14.761904761904762No Hit
GGTTCAGAGTGGGTGGGGCTCGGAGTGCCGAGAAGTGAAGGCGACTGCCC14.761904761904762No Hit
AAACACACTGTCCTCTCTTTTCACCTTTCCTCTATCTCTTCCATCTGTTT14.761904761904762No Hit
GAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCA14.761904761904762No Hit
CATGACCAGAGCCAAATTAACTCGAAAAACCAACAGAGCAACAAAGCTCC14.761904761904762No Hit
GTTTTTAAACTATTCGACAACTAATTGATGGCCATCCAAATTCCTGTCTC14.761904761904762No Hit
GGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTC14.761904761904762No Hit
TGAAGGCACATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTT14.761904761904762No Hit
ATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACTTCAT14.761904761904762No Hit
TTAGTAGGCTCATCTGTGAAATGGAGATGATGTATGTAAAGTCTGTCTCT14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)