FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_D5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_D5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTAGGCAGATGGTACATGCAATGAGAACTATTGGGACTCATCCTAGCT13.571428571428571No Hit
CTTCCAAATGTGTGCATATTGCAGCAAACTTGTTAGTTTCGATTTTCGGA13.571428571428571No Hit
CACAATTCTAAAGTTATAAATGGACAACCGCACCTACCTGTATCTTAAAC13.571428571428571No Hit
ATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAAT13.571428571428571No Hit
AAAAAACATAATCTCATTACAATCATCAACTTAATTCATATATCATTTTT13.571428571428571No Hit
CCTTTCCCGCAAGCTCGACGATCATTGGATTGAAGCATTGTCGCACAAAG13.571428571428571No Hit
TTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGATACCATC13.571428571428571No Hit
TCTCAGGACAGCAGACTCCACCCCAGATGTGCCTTCATCTGGATCTTCAG13.571428571428571No Hit
CAAAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGAGAGGAATG13.571428571428571No Hit
GTGGAGGCCCTGGTGTCTAGGGCCCGGATTGATTCCAGGGTCGACTTCGA13.571428571428571No Hit
AAGGTCGAAAGGTGCAATTCTCCAGTATTCAATTACAACAAGGCAACCAC13.571428571428571No Hit
TAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTC13.571428571428571No Hit
GCTCAGTTCATTGATGCTTAATGCTGGGCCATATTATTCTCTTGTCTGCT13.571428571428571No Hit
CTATGTTCTTTTCCAAGATCTCCTGGTCCAATCGCACGCAAAGAGGGCCT13.571428571428571No Hit
AATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTATGGACC13.571428571428571No Hit
CTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTATTCTCTCCATA13.571428571428571No Hit
AGAATAATGGACATGATTCCAGAGAGGAATGAACAAGGACAAACCCTCTG13.571428571428571No Hit
CCAAAAAAATGAATGCAAACTGAACTGAAATGAACTTTTCTTCACACACC13.571428571428571No Hit
CACTAAGACCAATGTGGAACATATCAAACAAATAAAAAATTACACAACAC13.571428571428571No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG13.571428571428571No Hit
CAACAAAAAAACCATATTTACATAAATTAAAACATAAATCCAAAAAATAT13.571428571428571No Hit
GATATGGCCCAGCATTAAGCACCAATGAACTCAGCAATCTAGAAAAAGGA13.571428571428571No Hit
GTAATGCTCTACTATGCCCGCCATTTTACATGGTAATTCAACTGACATTA13.571428571428571No Hit
CAATAAAAACAAAATAGAACAAATGCCAAAAATAAAAAAGTCCAAATCAG13.571428571428571No Hit
AAACAATAATGAAAATGAATCCACAAACAAAAGAAACATGACAAAAAAAC13.571428571428571No Hit
AATCTCTATACAACTAAGACAAAAAAGAAAAATCATCTCAAAAAACAGCA13.571428571428571No Hit
CCGTAACATGGTGGAATAGGAATGGCCCAACAACAAGTACAGTTCATTAC13.571428571428571No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT13.571428571428571No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)