FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_D2_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_D2_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACA16.25No Hit
CATCTGGATCTTCAGTCAATGCACCTGCATCCTTTCCAAGAACTGTAAGT16.25No Hit
GGACAAACCCTCTGGAGCAAAACAAACGATGCTGGATCAGACCGAGTGAT16.25No Hit
GGGCAAAGAAGACAAGAGATATGGCCCAGCATTAAGCATCAATGAACTGA16.25No Hit
TGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACCTGTCTCTTATA16.25No Hit
AGTATATTTTGCCTAGGAATGAGCATGAACCAGTCTCGTGACATTTCCTC16.25No Hit
ATGCTGGATCAGACCGAGTGATGGTATCACCTCTGGCCGTAACCTGTCTC16.25No Hit
GAATAATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAA16.25No Hit
GCATCACCCAATCCATTGTCTGCAAATCGCTTGCGGATATGCCAAAGGAA16.25No Hit
AACTAATTGAAGTCAATCAGAATTCTTTTGCTCTCTGTCTAGCTGTCAGT16.25No Hit
AACCTACCTCCTTCAGTGGGGGAGGACCACATTTTAAGCTGTCTCTTATA16.25No Hit
GTATAAGGGAATGTGGTGCTTATGGCATTTTGCGCTGGAATTTTTAGGAA16.25No Hit
CCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACC16.25No Hit
CTTTTATTCTCTCCATATTGAATATAATTGCTGTCTCTTATACACATCTG16.25No Hit
GTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCAT16.25No Hit
ATATAACAATGCATGGCAAAATTCAAAGGACTGAAATCACGCACAGATAC16.25No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)