FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_D2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_D2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTT25.88235294117647No Hit
TCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGCTG12.941176470588235No Hit
GCTGAATTCCCAGATGATGACGAGACGCCAATGACAATAACTACTGTCTC12.941176470588235No Hit
AATTAAAGCAGACAAGACAATAATGGACAAGATTACAGCGAGGAATGAAA12.941176470588235No Hit
GTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGGCCC12.941176470588235No Hit
AACTAACCCAAATTAACTAAACAATGCACATCAAAAAAATGCATATTAAG12.941176470588235No Hit
GAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGA12.941176470588235No Hit
GCTCATACCTTTAAACCCTAGGCTAAAGGGAAACCTTGACGATTACATAG12.941176470588235No Hit
GTAACACACACACACACACACACACACACACACACACACACTTCTCCCTA12.941176470588235No Hit
ATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGT12.941176470588235No Hit
ATGCTGGGCCAGATTATTCTCTTGTCTGATGTAAATGGGTATCTCATTTC12.941176470588235No Hit
CCTTTAATTTCAGCACCTAGAACAGTGCCTGGCAGAGAGTAGGTGCTCAG12.941176470588235No Hit
GGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTC12.941176470588235No Hit
AAAAAACCATATTGAGAAAAAAAAACTAAGCTTCAACAGAACAAGTGAAA12.941176470588235No Hit
CTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACTTATGTCT12.941176470588235No Hit
CTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTGGGCCAT12.941176470588235No Hit
CATTAGCGTTCTCTCCTTTTGCAAGATTGCTCCTGTCTCTTATACACATC12.941176470588235No Hit
TCCCAGGACCCGGGGTCATGACCTGAGCTGAAGGCAGCCGCTTCACCGAC12.941176470588235No Hit
CTCTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGG12.941176470588235No Hit
ATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCTGTCTCTT12.941176470588235No Hit
TTTCAGGATCGTGGGATCGAACACAGGGTCAGGCCCTGTGCTGCTCGTGG12.941176470588235No Hit
ATTCAATTACAACAAGGCAACCAAACGACTTACAGTTCTTGGAAAGGATG12.941176470588235No Hit
GAATTAATCAACAATGAACTGACCAAAATTTCAAAAGGAGAGAAATCTAA12.941176470588235No Hit
GAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGA12.941176470588235No Hit
CTGGAGAATAGAACCGAGTCCAGAAATCAACCCACACAAGGACCGCCAGC12.941176470588235No Hit
CAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCA12.941176470588235No Hit
AATCTTGTTTTTTTGCATCATCAACTTGCTTGTCAGTGTTGTCACTGGAT12.941176470588235No Hit
GACAAACCCTCTGGAGCAAAACAAACGATGCTGGATCCTGTCTCTTATAC12.941176470588235No Hit
CAAGAGAAGAACCCCGCACTCAGAATGAAGTGGACGATGGCAATGAGATA12.941176470588235No Hit
TAGTGAACAAGGACAAACCCTCTGGAGCAAAACAAACGATGCTGGATCAG12.941176470588235No Hit
AGACAGGAGAATAATGGACATGATTCCAGAGAGGAATGAACAAGGACAAA12.941176470588235No Hit
GAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAA12.941176470588235No Hit
GCCTTCATCTGGATCTTCAGTCAATGCACCTGCATCCTTTCCAAGAACTG12.941176470588235No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)